RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ARFGEF3Q5TH69 2177 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 FBN1P35555 2871 aaKnown RBP3.98□□□□□ -1.77
SF3B6-202ENST00000478050 MAP1AP78559 2803 aaPredicted RBP3.98□□□□□ -1.77
SF3B6-202ENST00000478050 A0A087X0M5 115 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 TRBV9A0A0B4J1U6 114 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 A0A1B0GX30 115 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 SRRM4A7MD48 611 aaKnown RBP3.98□□□□□ -1.77
SF3B6-202ENST00000478050 TSTD3H0UI37 97 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 TNFRSF13BO14836 293 aaPredicted RBP3.98□□□□□ -1.77
SF3B6-202ENST00000478050 AMBPP02760 352 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 IGKV1-16P04430 117 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 OR10J4P0C629 311 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 C8orf88P0DMB2 117 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 MYOD1P15172 320 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 OR10J1P30954 320 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 MC5RP33032 325 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF137PP52743 207 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 SUB1P53999 127 aaKnown RBP eCLIP3.98□□□□□ -1.77
SF3B6-202ENST00000478050 YPEL3P61236 119 aaPredicted RBP3.98□□□□□ -1.77
SF3B6-202ENST00000478050 PKIAP61925 76 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 RPL8P62917 257 aaKnown RBP3.98□□□□□ -1.77
SF3B6-202ENST00000478050 CCL8P80075 99 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 RBPJQ06330 500 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 BSPH1Q075Z2 132 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 PSG5Q15238 335 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 CLEC12BQ2HXU8 276 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 HLA-DRB5Q30154 266 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 COX19Q49B96 90 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 CFAP161Q6P656 301 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 MIR17HGQ75NE6 70 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF114Q8NC26 417 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 OR4C13Q8NGP0 309 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 OR1L4Q8NGR5 311 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 OR10X1Q8NGY0 326 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 OR9G1Q8NH87 305 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 SGMS2Q8NHU3 365 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 OCC1Q8TAD7 63 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM37Q8WXS4 190 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 FLYWCH2Q96CP2 140 aaKnown RBP3.98□□□□□ -1.77
SF3B6-202ENST00000478050 DERL1Q9BUN8 251 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 PRDM13Q9H4Q3 707 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 DYNLRB1Q9NP97 96 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 NDUFA4L2Q9NRX3 87 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM106BQ9NUM4 274 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 DCAF16Q9NXF7 216 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 KAAG1Q9UBP8 84 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 WASHC3Q9Y3C0 194 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 BSNQ9UPA5 3926 aa3.98□□□□□ -1.77
SF3B6-202ENST00000478050 TRBV20OR9-2A0A075B6H5 130 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 A0A1W2PRE2 83 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 HELTA6NFD8 242 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 PGPEP1LA6NFU8 196 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 OR7C2O60412 319 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 FOXH1O75593 365 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 NUDT3O95989 172 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 CCL3L1P16619 93 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 CHRNB4P30926 498 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 LGALS7P47929 136 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 GNG4P50150 75 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 DLX6P56179 175 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 BPIFB3P59826 476 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 SELENOTP62341 195 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 DEFA6Q01524 100 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF90Q03938 601 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 GAMTQ14353 236 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 RPEL1Q2QD12 228 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 VMA21Q3ZAQ7 101 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM155Q4W5P6 130 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 TGIF2LXQ8IUE1 241 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 GBGT1Q8N5D6 347 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 THAP8Q8NA92 274 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 Q8NA96 180 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 H1FXQ92522 213 aaKnown RBP3.97□□□□□ -1.77
SF3B6-202ENST00000478050 RND1Q92730 232 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 TNFRSF14Q92956 283 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 RNASE6Q93091 150 aaKnown RBP3.97□□□□□ -1.77
SF3B6-202ENST00000478050 ST6GALNAC6Q969X2 333 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 SNRNP40Q96DI7 357 aaKnown RBP3.97□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF430Q9H8G1 570 aaPredicted RBP3.97□□□□□ -1.77
SF3B6-202ENST00000478050 OSTCQ9NRP0 149 aa3.97□□□□□ -1.77
SF3B6-202ENST00000478050 MALRD1Q5VYJ5 2156 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 PKDREJQ9NTG1 2253 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 IGKV1OR2-108A0A075B7D4 117 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 TCRBV4S1A1TA0A5B7 111 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 PSMB11A5LHX3 300 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 SHISA9B4DS77 424 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 E7EQL1 145 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 K7EN84 100 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 COX7A2P2O60397 106 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 FSTL3O95633 263 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 IGLV2-23P01705 113 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 MT-ND6P03923 174 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 GZMBP10144 247 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 HNF1AP20823 631 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 CRYBB3P26998 211 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 LOXP28300 417 aaPredicted RBP3.96□□□□□ -1.78
SF3B6-202ENST00000478050 APOBEC3AP31941 199 aaPredicted RBP3.96□□□□□ -1.78
SF3B6-202ENST00000478050 TAS2R60P59551 318 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 IQCJQ1A5X6 159 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 TIGITQ495A1 244 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms