RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 TMEM267Q0VDI3 215 aaPredicted RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 EBPQ15125 230 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 C12orf74Q32Q52 190 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 PYY3Q5JQD4 70 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 IBA57Q5T440 356 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 Q5XG85 94 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 RASL11AQ6T310 242 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 GLIPR1L1Q6UWM5 242 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 DGAT2L6Q6ZPD8 337 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ZNF767PQ75MW2 155 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 FAM19A3Q7Z5A8 133 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 CROCCP2Q86T23 111 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 MMGT1Q8N4V1 131 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ANKRD29Q8N6D5 301 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TMEM229BQ8NBD8 167 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 OR10P1Q8NGE3 313 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 OR4C16Q8NGL9 310 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 OR5K1Q8NHB7 308 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 PLEKHB2Q96CS7 222 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 CARD19Q96LW7 228 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 CNBD2Q96M20 576 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 MGLLQ99685 303 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 PRSS27Q9BQR3 290 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ADAT1Q9BUB4 502 aaKnown RBP1.07□□□□□ -2.24
VPS50-213ENST00000477572 TMEM147Q9BVK8 224 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TTTY12Q9BZ98 90 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 OR8D2Q9GZM6 311 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 CHST6Q9GZX3 395 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 GTSF1LQ9H1H1 148 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 PRO1933Q9H354 126 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TAF9BQ9HBM6 251 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 HES4Q9HCC6 221 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 PRTFDC1Q9NRG1 225 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TVP23BQ9NYZ1 205 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 OR5AC2Q9NZP5 309 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 SCP2D1Q9UJQ7 156 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 CYSLTR1Q9Y271 337 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 MED31Q9Y3C7 131 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 PXMP4Q9Y6I8 212 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 SIPA1L1O43166 1804 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 SYNJ1O43426 1573 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 ADAMTS12P58397 1594 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 FRMPD1Q5SYB0 1578 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 TONSLQ96HA7 1378 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 KIF21AQ7Z4S6 1674 aa1.07□□□□□ -2.24
VPS50-213ENST00000477572 OVOS2A0A0G2JMS6 1433 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 CRB1P82279 1406 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 ARHGAP31Q2M1Z3 1444 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 MYOM3Q5VTT5 1437 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 PZPP20742 1482 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 GRIN2AQ12879 1464 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 TEX14Q8IWB6 1497 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 N4BP2Q86UW6 1770 aaPredicted RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 MYO18AQ92614 2054 aaKnown RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 NUMA1Q14980 2115 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 SLX4Q8IY92 1834 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 hCG_1818297A0A087WSY0 165 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 TRAV38-1A0A0B4J264 116 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 IGKV1-12A0A0C4DH73 117 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 DHRS12A0PJE2 317 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 KNCNA6PVL3 124 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 A8MT66 165 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 LY6LH3BQJ8 138 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 CCDC179H3BU77 68 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 J3QQQ9 107 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 SNAPC5O75971 98 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 NDUFC2O95298 119 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 IGKV1D-12P01611 117 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 HLA-DRB1P01911 266 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 MT-ND4LP03901 98 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 PPP1CCP36873 323 aaKnown RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 RBM11P57052 281 aaKnown RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 TAS2R20P59543 309 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 S100A10P60903 97 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 BTG2P78543 158 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 RHOGP84095 191 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 PSG9Q00887 426 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 EIF3IQ13347 325 aaKnown RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 HES1Q14469 280 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 CENPWQ5EE01 88 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 FAM74A1Q5RGS3 127 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 COL5A1-AS1Q5SY13 56 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 GLT8D1Q68CQ7 371 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 LCN8Q6JVE9 175 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 SCGB1D4Q6XE38 83 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 ATP5L2Q7Z4Y8 100 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 VN1R4Q7Z5H5 301 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 SLC35E3Q7Z769 313 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 C20orf196Q8IYI0 205 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 SLC25A45Q8N413 288 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 LINC00471Q8N535 108 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 TCTEX1D1Q8N7M0 179 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 OR5A1Q8NGJ0 315 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 OR51A4Q8NGJ6 313 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 CT55Q8WUE5 264 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 GPR146Q96CH1 333 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 ADAT3Q96EY9 351 aaPredicted RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 ERMAPQ96PL5 475 aaPredicted RBP1.06□□□□□ -2.24
VPS50-213ENST00000477572 TSPAN32Q96QS1 320 aa1.06□□□□□ -2.24
VPS50-213ENST00000477572 MRPL57Q9BQC6 102 aaKnown RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms