RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MT-CO2P00403 227 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 CXCL2P19875 107 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 CBLN1P23435 193 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 ARL16Q0P5N6 197 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 FAM209BQ5JX69 171 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 C21orf62Q9NYP8 219 aa13.3□□□□□ -0.28
PTPN7-209ENST00000477554 MRPL36Q9P0J6 103 aaKnown RBP13.3□□□□□ -0.28
PTPN7-209ENST00000477554 TAAR5O14804 337 aa13.29□□□□□ -0.28
PTPN7-209ENST00000477554 ZNF207O43670 478 aaKnown RBP13.29□□□□□ -0.28
PTPN7-209ENST00000477554 DFFBO76075 338 aa13.29□□□□□ -0.28
PTPN7-209ENST00000477554 CD7P09564 240 aa13.29□□□□□ -0.28
PTPN7-209ENST00000477554 C4BPBP20851 252 aa13.29□□□□□ -0.28
PTPN7-209ENST00000477554 MLANAQ16655 118 aa13.29□□□□□ -0.28
PTPN7-209ENST00000477554 LGALSLQ3ZCW2 172 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-209ENST00000477554 SLC16A13Q7RTY0 426 aa13.29□□□□□ -0.28
PTPN7-209ENST00000477554 SLC35E1Q96K37 410 aa13.29□□□□□ -0.28
PTPN7-209ENST00000477554 ARL6Q9H0F7 186 aa13.29□□□□□ -0.28
PTPN7-209ENST00000477554 FNDC4Q9H6D8 234 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-209ENST00000477554 KANTRA0A1W2PQU2 76 aa13.28□□□□□ -0.28
PTPN7-209ENST00000477554 CTSGP08311 255 aa13.28□□□□□ -0.28
PTPN7-209ENST00000477554 TMUB2Q71RG4 321 aa13.28□□□□□ -0.28
PTPN7-209ENST00000477554 C9orf62Q8N4C0 152 aa13.28□□□□□ -0.28
PTPN7-209ENST00000477554 ATP5SQ99766 215 aa13.28□□□□□ -0.28
PTPN7-209ENST00000477554 TMEM147Q9BVK8 224 aa13.28□□□□□ -0.28
PTPN7-209ENST00000477554 NPVFQ9HCQ7 196 aa13.28□□□□□ -0.28
PTPN7-209ENST00000477554 FBXL17Q9UF56 701 aa13.28□□□□□ -0.28
PTPN7-209ENST00000477554 A8MWP6 167 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 NKX2-5P52952 324 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-209ENST00000477554 ZNF266Q14584 549 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 CLINT1Q14677 625 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 Q56UQ5 140 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 BTNL8Q6UX41 500 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 TMEM61Q8N0U2 210 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 DYNLRB2Q8TF09 96 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 BSCL2Q96G97 398 aaPredicted RBP13.27□□□□□ -0.29
PTPN7-209ENST00000477554 ARPC5LQ9BPX5 153 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 SMIM3Q9BZL3 60 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 UQCC1Q9NVA1 299 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 C19orf73Q9NVV2 129 aa13.27□□□□□ -0.29
PTPN7-209ENST00000477554 KMT2CQ8NEZ4 4911 aaKnown RBP13.27□□□□□ -0.29
PTPN7-209ENST00000477554 MFAP4P55083 255 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 GAMTQ14353 236 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 VWC2Q2TAL6 325 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 FAM106AQ4KMX7 169 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 LCN12Q6JVE5 192 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 TMEM116Q8NCL8 245 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 TMEM190Q8WZ59 177 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 ATP6V0BQ99437 205 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 TXN2Q99757 166 aa13.26□□□□□ -0.29
PTPN7-209ENST00000477554 BORCS7-ASMTA0A0B4J1R7 106 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 SMCO3A2RU48 225 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 BCL2L11O43521 198 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 IFNA5P01569 189 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 FCGR2BP31994 310 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-209ENST00000477554 NPBWR1P48145 328 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 AKR1C1Q04828 323 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 LAMTOR1Q6IAA8 161 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 OR4X1Q8NH49 305 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
PTPN7-209ENST00000477554 STAB2Q8WWQ8 2551 aa13.25□□□□□ -0.29
PTPN7-209ENST00000477554 IGHV3-49A0A0A0MS15 119 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 SCGB2A1O75556 95 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 JTBO76095 146 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 C8orf88P0DMB2 117 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 GUCA2BQ16661 112 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 TMEM144Q7Z5S9 345 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 DEFB125Q8N687 156 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 ACY3Q96HD9 319 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 U3KQK5 164 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 NBEAL2Q6ZNJ1 2754 aa13.24□□□□□ -0.29
PTPN7-209ENST00000477554 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
PTPN7-209ENST00000477554 RND2P52198 227 aa13.23□□□□□ -0.29
PTPN7-209ENST00000477554 CD81P60033 236 aa13.23□□□□□ -0.29
PTPN7-209ENST00000477554 TEPPQ6URK8 271 aa13.23□□□□□ -0.29
PTPN7-209ENST00000477554 SCGB1C1Q8TD33 95 aa13.23□□□□□ -0.29
PTPN7-209ENST00000477554 NPIPB3Q92617 1050 aa13.23□□□□□ -0.29
PTPN7-209ENST00000477554 C20orf24Q9BUV8 137 aa13.23□□□□□ -0.29
PTPN7-209ENST00000477554 PARD6GQ9BYG4 376 aaPredicted RBP13.23□□□□□ -0.29
PTPN7-209ENST00000477554 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
PTPN7-209ENST00000477554 TRAV30A0A087WSZ9 112 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 GNG7O60262 68 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 MPDU1O75352 247 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 CLN5O75503 358 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 EIF5AP63241 154 aaKnown RBP13.22□□□□□ -0.29
PTPN7-209ENST00000477554 OPCMLQ14982 345 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 WDR83OSQ9Y284 106 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 IGHV3OR16-13A0A075B7E8 117 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 IGHV3-74A0A0B4J1X5 117 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 RAB31Q13636 194 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 THAP8Q8NA92 274 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 OR2K2Q8NGT1 345 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 ZNF471Q9BX82 626 aaPredicted RBP13.22□□□□□ -0.29
PTPN7-209ENST00000477554 WDR61Q9GZS3 305 aaKnown RBP13.22□□□□□ -0.29
PTPN7-209ENST00000477554 RETNQ9HD89 108 aa13.22□□□□□ -0.29
PTPN7-209ENST00000477554 RBMY1BA6NDE4 496 aaKnown RBP13.21□□□□□ -0.3
PTPN7-209ENST00000477554 RBMY1EA6NEQ0 496 aaKnown RBP13.21□□□□□ -0.3
PTPN7-209ENST00000477554 ZFP92A6NM28 416 aa13.21□□□□□ -0.3
PTPN7-209ENST00000477554 NDUFA4O00483 81 aa13.21□□□□□ -0.3
PTPN7-209ENST00000477554 RBMY1DP0C7P1 496 aaKnown RBP13.21□□□□□ -0.3
PTPN7-209ENST00000477554 NHLRC4P0CG21 123 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms