RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 C22orf46C9J442 243 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 HSBP1L1C9JCN9 74 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 CA1P00915 261 aaPredicted RBP10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 LIPFP07098 398 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 GNG10P50151 68 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 RHOGP84095 191 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 LINC00311Q8N616 119 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 DEFB124Q8NES8 71 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 OR4C13Q8NGP0 309 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 MBD3L2Q8NHZ7 208 aaPredicted RBP10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 PMCHL2Q9BQD1 86 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 UNC79Q9P2D8 2635 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 C19orf71A6NCJ1 209 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 OR4C46A6NHA9 309 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 SYS1-DBNDD2H3BUS1 97 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 DSCAMO60469 2012 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 CD59P13987 128 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 RBX1P62877 108 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 MSMPQ1L6U9 139 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 LCN12Q6JVE5 192 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 PATE2Q6UY27 113 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 RBPMS2Q6ZRY4 209 aaKnown RBP10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 RBMXL3Q8N7X1 1067 aaKnown RBP10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 FLYWCH2Q96CP2 140 aaKnown RBP10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 TRGV9Q99603 122 aa10.93□□□□□ -0.66
HLA-DMA-208ENST00000477541 TRAV5A0A0B4J249 113 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 TRAV34A0A0B4J273 112 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 LTAP01374 205 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 SLC25A5P05141 298 aaKnown RBP10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 TNFAIP6P98066 277 aaPredicted RBP10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 FAM120AOSQ5T036 256 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 SLC25A34Q6PIV7 304 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 UNQ5815/PRO19632Q6UWF5 114 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 OR2T6Q8NHC8 308 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 TMEM186Q96B77 213 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 GSX1Q9H4S2 264 aaPredicted RBP10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 HSPB8Q9UJY1 196 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 HEATR1Q9H583 2144 aaKnown RBP10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 DYSFO75923 2080 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 KALRNO60229 2985 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 IGKV1D-37A0A075B6S9 117 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 A0A1B0GW15 77 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 NPIPB6E9PJ23 425 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 CORTO00230 105 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 SPRY3O43610 288 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 LEPROTL1O95214 131 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 P01737 135 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 CRYGCP07315 174 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 PYYP10082 97 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 PLP1P60201 277 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 UTF1Q5T230 341 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 MORN5Q5VZ52 161 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 SSX8Q7RTT4 187 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 LINC00305Q7Z4B0 112 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 ATOH7Q8N100 152 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 OR4C5Q8NGB2 326 aa10.92□□□□□ -0.66
HLA-DMA-208ENST00000477541 PCNX2A6NKB5 2137 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 TOX4O94842 621 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 CAMPP49913 170 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 VMA21Q3ZAQ7 101 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 PIP4P1Q86T03 277 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 GATD1Q8NB37 220 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 OR10W1Q8NGF6 305 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 NPIPB3Q92617 1050 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 URB1-AS1Q96HZ7 61 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 LINC00479Q96M42 142 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 MAP1LC3CQ9BXW4 147 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 MRPL20Q9BYC9 149 aaKnown RBP10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 PPIAL4AQ9Y536 164 aa10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 RAI1Q7Z5J4 1906 aaPredicted RBP10.91□□□□□ -0.66
HLA-DMA-208ENST00000477541 IGHV1-24A0A0C4DH33 117 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 M0R1B8 84 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 HAX1O00165 279 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 PPBPP02775 128 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 MC5RP33032 325 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 ZNF137PP52743 207 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 MLANAQ16655 118 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 DPF1Q92782 380 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 DAZAP1Q96EP5 407 aaKnown RBP10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 WASHC3Q9Y3C0 194 aa10.9□□□□□ -0.66
HLA-DMA-208ENST00000477541 LOC102724200A0A096LPH7 203 aaPredicted RBP10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 IGHV1-46P01743 117 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 NBEAP1P0C6P0 100 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 PLA2G2AP14555 144 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 LGALS7P47929 136 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 FOXA3P55318 350 aaPredicted RBP10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 WT1-ASQ06250 92 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 COTL1Q14019 142 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 MAJINQ3KP22 176 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 HES3Q5TGS1 186 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 PRR27Q6MZM9 219 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 SPATA12Q7Z6I5 190 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 DEFB125Q8N687 156 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 FNDC4Q9H6D8 234 aaPredicted RBP10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 TMEM14CQ9P0S9 112 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 ACACAQ13085 2346 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 LOC105371242A0A075B767 164 aa10.89□□□□□ -0.67
HLA-DMA-208ENST00000477541 PGPA6NDG6 321 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms