RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 SMCO3A2RU48 225 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 ZNF207O43670 478 aaKnown RBP9.92□□□□□ -0.82
TOP3A-205ENST00000477508 PSG1P11464 419 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 S100A11P31949 105 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 NUP62P37198 522 aaPredicted RBP9.92□□□□□ -0.82
TOP3A-205ENST00000477508 P2RY1P47900 373 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 SULT1A1P50225 295 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 LRRC37A5PQ49AS3 106 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 BTNL8Q6UX41 500 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 RBPMS2Q6ZRY4 209 aaKnown RBP9.92□□□□□ -0.82
TOP3A-205ENST00000477508 TMEM252Q8N6L7 170 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 RHPN1-AS1Q9BWJ2 59 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 MLXQ9UH92 298 aa9.92□□□□□ -0.82
TOP3A-205ENST00000477508 IGKV1D-37A0A075B6S9 117 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 FAM24AA6NFZ4 105 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 CHEK1O14757 476 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 MPC2O95563 127 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 IL4P05112 153 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 CXCL3P19876 107 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 CRYBB3P26998 211 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 S100A7P31151 101 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 RRAS2P62070 204 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-205ENST00000477508 SELENOTP62341 195 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 SLC38A11Q08AI6 406 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 ATP6V1FQ16864 119 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 TEPPQ6URK8 271 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 GTSCR1Q86UQ5 136 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 HAPLN4Q86UW8 402 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 GRAMD2BQ96HH9 432 aa9.91□□□□□ -0.82
TOP3A-205ENST00000477508 IGKV1OR2-108A0A075B7D4 117 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 WI2-2373I1.2A0A1W2PRP0 233 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 TSPAN4O14817 238 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 CCNKO75909 580 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 CST7O76096 145 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 PRB2P02812 416 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-205ENST00000477508 HNRNPCP07910 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
TOP3A-205ENST00000477508 EDN2P20800 178 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 EIF2B2P49770 351 aaKnown RBP9.9□□□□□ -0.82
TOP3A-205ENST00000477508 ZNF90Q03938 601 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 BAXQ07812 192 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 FGL1Q08830 312 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 RAB31Q13636 194 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 FCN2Q15485 313 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 TMEM61Q8N0U2 210 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 BPIFCQ8NFQ6 507 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 OR11H7Q8NGC8 314 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 MRAPQ8TCY5 172 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 RNF125Q96EQ8 232 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 PRR25Q96S07 402 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 SPAG8Q99932 426 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-205ENST00000477508 VSIRQ9H7M9 311 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 OR5AC2Q9NZP5 309 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 RABAC1Q9UI14 185 aa9.9□□□□□ -0.82
TOP3A-205ENST00000477508 IGSF23A1L1A6 192 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 IZUMO1RA6ND01 250 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 ZNF785A8K8V0 405 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 H0YIZ8 118 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 K7EIL1 84 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 GIPP09681 153 aaPredicted RBP9.89□□□□□ -0.83
TOP3A-205ENST00000477508 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
TOP3A-205ENST00000477508 RAP2BP61225 183 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 PAFAH1B2P68402 229 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 ARL16Q0P5N6 197 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 GUCA2BQ16661 112 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 S100A7AQ86SG5 101 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 LILRB2Q8N423 598 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 TMEM217Q8N7C4 229 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 THAP6Q8TBB0 222 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 RNF126Q9BV68 326 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 UQCC1Q9NVA1 299 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 SLC45A2Q9UMX9 530 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 U3KQE9 123 aa9.89□□□□□ -0.83
TOP3A-205ENST00000477508 AP2S1P53680 142 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-205ENST00000477508 EWSR1Q01844 656 aaKnown RBP eCLIP9.88□□□□□ -0.83
TOP3A-205ENST00000477508 USF2Q15853 346 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-205ENST00000477508 VWC2Q2TAL6 325 aa9.88□□□□□ -0.83
TOP3A-205ENST00000477508 CYP2G1PQ6ZSU1 146 aa9.88□□□□□ -0.83
TOP3A-205ENST00000477508 ZNF546Q86UE3 836 aa9.88□□□□□ -0.83
TOP3A-205ENST00000477508 ST8SIA2Q92186 375 aa9.88□□□□□ -0.83
TOP3A-205ENST00000477508 WDR89Q96FK6 387 aaPredicted RBP9.88□□□□□ -0.83
TOP3A-205ENST00000477508 RNF2Q99496 336 aa9.88□□□□□ -0.83
TOP3A-205ENST00000477508 TMEM147Q9BVK8 224 aa9.88□□□□□ -0.83
TOP3A-205ENST00000477508 LSM4Q9Y4Z0 139 aaKnown RBP9.88□□□□□ -0.83
TOP3A-205ENST00000477508 IGHV3-49A0A0A0MS15 119 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 HELTA6NFD8 242 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 OR4C46A6NHA9 309 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 MPDU1O75352 247 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 LYL1P12980 280 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 CMC4P56277 68 aaPredicted RBP9.87□□□□□ -0.83
TOP3A-205ENST00000477508 LYZP61626 148 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 OR2F1Q13607 317 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 DEFB121Q5J5C9 76 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 PXDC1Q5TGL8 231 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 FAM90A2PQ658T7 463 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 TCF24Q7RTU0 167 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 PBDC1Q9BVG4 233 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 RNF24Q9Y225 148 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 SMAD5-AS1Q9Y6J3 95 aa9.87□□□□□ -0.83
TOP3A-205ENST00000477508 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
TOP3A-205ENST00000477508 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms