RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 VKORC1Q9BQB6 163 aa8.99□□□□□ -0.97
COL27A1-204ENST00000477421 TRAV8-1A0A0A6YYK1 113 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 FAM106CPP0CH98 169 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 PCP4P48539 62 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 COX19Q49B96 90 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 OR5R1Q8NH85 324 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 ATG101Q9BSB4 218 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 BET1LQ9NYM9 111 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 SORL1Q92673 2214 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 ZNF25P17030 456 aaPredicted RBP8.98□□□□□ -0.97
COL27A1-204ENST00000477421 CNTFRP26992 372 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 SEM1Q6ZVN7 128 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 TCAPO15273 167 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 TFPI2P48307 235 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 PAFAH1B2P68402 229 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 LYPD6BQ8NI32 183 aa8.98□□□□□ -0.97
COL27A1-204ENST00000477421 TBL2Q9Y4P3 447 aaKnown RBP8.98□□□□□ -0.97
COL27A1-204ENST00000477421 BMPR1BO00238 502 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 IGLV2-14P01704 120 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 LOXL3P58215 753 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 RIGQ13278 110 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 UTF1Q5T230 341 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 FAM162BQ5T6X4 162 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 RNASEH2CQ8TDP1 164 aaKnown RBP8.97□□□□□ -0.97
COL27A1-204ENST00000477421 Q9H3A6 140 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 TPSG1Q9NRR2 321 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 TANC2Q9HCD6 1990 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.97□□□□□ -0.97
COL27A1-204ENST00000477421 TCRBV4S1A1TA0A5B7 111 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 OR2T8A6NH00 312 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 RNASE2P10153 161 aaKnown RBP8.97□□□□□ -0.97
COL27A1-204ENST00000477421 GPR183P32249 361 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 TMEM242Q9NWH2 141 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 CHTOPQ9Y3Y2 248 aaKnown RBP8.97□□□□□ -0.97
COL27A1-204ENST00000477421 CHD3Q12873 2000 aaKnown RBP8.97□□□□□ -0.97
COL27A1-204ENST00000477421 ARHGAP32A7KAX9 2087 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 GZMBP10144 247 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 VDAC2P45880 294 aaPredicted RBP8.97□□□□□ -0.97
COL27A1-204ENST00000477421 EXOC3-AS1Q8N2X6 119 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 C5orf30Q96GV9 206 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 RABAC1Q9UI14 185 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 ZNF257Q9Y2Q1 563 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 HIVEP3Q5T1R4 2406 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 PRSS1P07477 247 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 GRNP28799 593 aaKnown RBP8.97□□□□□ -0.97
COL27A1-204ENST00000477421 ATP5IP56385 69 aaPredicted RBP8.97□□□□□ -0.97
COL27A1-204ENST00000477421 RNF24Q9Y225 148 aa8.97□□□□□ -0.97
COL27A1-204ENST00000477421 PRSS8Q16651 343 aa8.96□□□□□ -0.97
COL27A1-204ENST00000477421 C2orf83Q53S99 150 aa8.96□□□□□ -0.97
COL27A1-204ENST00000477421 SH2D7A6NKC9 451 aaPredicted RBP8.96□□□□□ -0.98
COL27A1-204ENST00000477421 PF4P02776 101 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 PSG1P11464 419 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 CA7P43166 264 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 TWIST1Q15672 202 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 C22orf34Q6ZV56 151 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 C14orf144Q96I85 54 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 SCRT1Q9BWW7 348 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 IGHV1-3A0A0C4DH29 117 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 A0A1W2PRE2 83 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 TMEM189A5PLL7 270 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 FAM90A9PA6NNJ1 464 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 PFN1P07737 140 aaKnown RBP8.96□□□□□ -0.98
COL27A1-204ENST00000477421 CEACAM8P31997 349 aaPredicted RBP8.96□□□□□ -0.98
COL27A1-204ENST00000477421 SPATA45Q537H7 98 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 TMEM14BQ9NUH8 114 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 C21orf62Q9NYP8 219 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 FBXL7Q9UJT9 491 aa8.96□□□□□ -0.98
COL27A1-204ENST00000477421 IGLV3-9A0A075B6K5 115 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 A0A1W2PPI3 338 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 PMS2P5A8MQ11 134 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 F5H697 171 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 HINT1P49773 126 aaPredicted RBP8.95□□□□□ -0.98
COL27A1-204ENST00000477421 ATP5J2P56134 94 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 RNF151Q2KHN1 245 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 ST6GALNAC3Q8NDV1 305 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 GPR82Q96P67 336 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 PMCHL2Q9BQD1 86 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 LEPROTL1O95214 131 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 IGFL3Q6UXB1 125 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 ST6GALNAC6Q969X2 333 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 EPDR1Q9UM22 224 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 MGAQ8IWI9 3026 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 LRRK2Q5S007 2527 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 NBR2O15453 112 aa8.95□□□□□ -0.98
COL27A1-204ENST00000477421 A1L4Q6 167 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 RNF224P0DH78 156 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 WT1-ASQ06250 92 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 TMEM167AQ8TBQ9 72 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 TMEM191AQ9H0A3 160 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 FRYLO94915 3013 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 NUP37Q8NFH4 326 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 MAP1LC3CQ9BXW4 147 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 PROP1O75360 226 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 IGFL4Q6B9Z1 124 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 CDPF1Q6NVV7 123 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 TEX45Q8NA69 505 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 ARPC1AQ92747 370 aa8.94□□□□□ -0.98
COL27A1-204ENST00000477421 GGCTO75223 188 aaKnown RBP8.93□□□□□ -0.98
COL27A1-204ENST00000477421 IGHV3-11P01762 117 aa8.93□□□□□ -0.98
COL27A1-204ENST00000477421 LOXP28300 417 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms