RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 ZNF286BP0CG31 522 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 CRYGSP22914 178 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 RNASE4P34096 147 aaKnown RBP3.74□□□□□ -1.81
NUP58-209ENST00000476553 ARPP19P56211 112 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 CCSMST1Q4G0I0 132 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 ZNF322Q6U7Q0 402 aaPredicted RBP3.74□□□□□ -1.81
NUP58-209ENST00000476553 ZFP2Q6ZN57 461 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 HIST3H2BBQ8N257 126 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 TEX29Q8N6K0 151 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 CNEP1R1Q8N9A8 125 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 SPANXA2-OT1Q8N9U9 137 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 OR5A2Q8NGI9 324 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 OSTCQ9NRP0 149 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 SCN3BQ9NY72 215 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 SOX21Q9Y651 276 aaPredicted RBP3.74□□□□□ -1.81
NUP58-209ENST00000476553 SIPA1L1O43166 1804 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 ECM29Q5VYK3 1845 aa3.74□□□□□ -1.81
NUP58-209ENST00000476553 PPIP5K1Q6PFW1 1433 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.73□□□□□ -1.81
NUP58-209ENST00000476553 PINLYPA6NC86 204 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 A8MWP6 167 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 SOD1P00441 154 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 LHBP01229 141 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 IFNA17P01571 189 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 IGHV1-69P01742 117 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 IGHV3-7P01780 117 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 IGKV1-16P04430 117 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 GUCA1AP43080 201 aaPredicted RBP3.73□□□□□ -1.81
NUP58-209ENST00000476553 C22orf39Q6P5X5 142 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 TEX261Q6UWH6 196 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 MIR17HGQ75NE6 70 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 BPIFA4PQ86YQ2 179 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 C8orf59Q8N0T1 100 aaPredicted RBP3.73□□□□□ -1.81
NUP58-209ENST00000476553 ACBD7Q8N6N7 88 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.73□□□□□ -1.81
NUP58-209ENST00000476553 NAT14Q8WUY8 206 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 HIST1H2BLQ99880 126 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 TMEM191AQ9H0A3 160 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 MARCOQ9UEW3 520 aaPredicted RBP3.73□□□□□ -1.81
NUP58-209ENST00000476553 OR5V1Q9UGF6 321 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 ICOSQ9Y6W8 199 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 ANKRD12Q6UB98 2062 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 MBD5Q9P267 1494 aa3.73□□□□□ -1.81
NUP58-209ENST00000476553 BRWD3Q6RI45 1802 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 NAIPQ13075 1403 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 NUP205Q92621 2012 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 A0A096LNJ9 63 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 LOC100130705A0A1B0GUX0 176 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 GRIFINA4D1Z8 144 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 NDUFB3O43676 98 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 LY6HO94772 140 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 NPYP01303 97 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 CCL5P13501 91 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 MPV17P39210 176 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 AQP4P55087 323 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 QRFPP83859 136 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 RELAQ04206 551 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 GTF3C1Q12789 2109 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 HSD17B12Q53GQ0 312 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 ZNF880Q6PDB4 577 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 ZNF705AQ6ZN79 300 aaPredicted RBP3.72□□□□□ -1.81
NUP58-209ENST00000476553 APCDD1LQ8NCL9 501 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 CLDND2Q8NHS1 167 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 BANF2Q9H503 90 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 U3KQK5 164 aa3.72□□□□□ -1.81
NUP58-209ENST00000476553 RPRD2Q5VT52 1461 aaKnown RBP3.72□□□□□ -1.81
NUP58-209ENST00000476553 MED1Q15648 1581 aaPredicted RBP3.72□□□□□ -1.81
NUP58-209ENST00000476553 PIK3C2AO00443 1686 aa3.71□□□□□ -1.81
NUP58-209ENST00000476553 MYOM3Q5VTT5 1437 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 TRGV10A0A0A0MS01 117 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 TRBV6-6A0A0A6YYG2 114 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 TRBV27A0A0K0K1C4 114 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 ZNF727A8MUV8 499 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 HIST1H2BKO60814 126 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 HIST1H2BJP06899 126 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 GNG4P50150 75 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 FOXA3P55318 350 aaPredicted RBP3.71□□□□□ -1.82
NUP58-209ENST00000476553 PKIAP61925 76 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 HES1Q14469 280 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 KISS1Q15726 138 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 DEFB116Q30KQ4 102 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 SDIM1Q6ZPB5 146 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 SMCR5Q8TEV8 140 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 PP6455Q8WZ26 134 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 SCGB3A1Q96QR1 104 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 FANCMQ8IYD8 2048 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 BAZ1BQ9UIG0 1483 aaKnown RBP3.71□□□□□ -1.82
NUP58-209ENST00000476553 CEP164Q9UPV0 1460 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 SYNJ1O43426 1573 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 TTC37Q6PGP7 1564 aa3.71□□□□□ -1.82
NUP58-209ENST00000476553 ZNF638Q14966 1978 aaKnown RBP3.71□□□□□ -1.82
NUP58-209ENST00000476553 KDM6AO15550 1401 aaPredicted RBP3.7□□□□□ -1.82
NUP58-209ENST00000476553 TOPBP1Q92547 1522 aa3.7□□□□□ -1.82
NUP58-209ENST00000476553 IGKV1OR2-108A0A075B7D4 117 aa3.7□□□□□ -1.82
NUP58-209ENST00000476553 TRAV27A0A087WT01 109 aa3.7□□□□□ -1.82
NUP58-209ENST00000476553 C19orf71A6NCJ1 209 aa3.7□□□□□ -1.82
NUP58-209ENST00000476553 OR2T8A6NH00 312 aa3.7□□□□□ -1.82
NUP58-209ENST00000476553 A8MWV9 139 aa3.7□□□□□ -1.82
NUP58-209ENST00000476553 M0R143 59 aa3.7□□□□□ -1.82
NUP58-209ENST00000476553 AKAIN1P0CW23 69 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms