RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 KIR2DL5BA0A0G2JPC4 375 aa11.98□□□□□ -0.49
COL1A1-205ENST00000476387 UBE2CO00762 179 aa11.98□□□□□ -0.49
COL1A1-205ENST00000476387 RPL35AP18077 110 aaKnown RBP11.98□□□□□ -0.49
COL1A1-205ENST00000476387 NKX2-1P43699 371 aaPredicted RBP11.98□□□□□ -0.49
COL1A1-205ENST00000476387 SPANXN5Q5MJ07 72 aa11.98□□□□□ -0.49
COL1A1-205ENST00000476387 Q6ZWC4 215 aa11.98□□□□□ -0.49
COL1A1-205ENST00000476387 KIR2DL5AQ8N109 375 aa11.98□□□□□ -0.49
COL1A1-205ENST00000476387 OR51G1Q8NGK1 321 aa11.98□□□□□ -0.49
COL1A1-205ENST00000476387 KIR2DL5BQ8NHK3 375 aa11.98□□□□□ -0.49
COL1A1-205ENST00000476387 STRAPQ9Y3F4 350 aaKnown RBP11.98□□□□□ -0.49
COL1A1-205ENST00000476387 TRAV6A0A075B6T7 132 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 HELTA6NFD8 242 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 MPTX1A8MV57 137 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 H3BP45 60 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 TCRBP04435 133 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 PSG1P11464 419 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 USF2Q15853 346 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-205ENST00000476387 STPG3Q8N7X2 389 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 MITD1Q8WV92 249 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 RNF125Q96EQ8 232 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 NUDT15Q9NV35 164 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 PFDN2Q9UHV9 154 aa11.97□□□□□ -0.49
COL1A1-205ENST00000476387 A6NHS1 94 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 SSSCA1O60232 199 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 SCGB1D2O95969 90 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.49
COL1A1-205ENST00000476387 POLR2GP62487 172 aaKnown RBP eCLIP11.96□□□□□ -0.49
COL1A1-205ENST00000476387 ID3Q02535 119 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 ZNF124Q15973 351 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 IAH1Q2TAA2 248 aaPredicted RBP11.96□□□□□ -0.49
COL1A1-205ENST00000476387 MZT2BQ6NZ67 158 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 OR4D5Q8NGN0 318 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 PBDC1Q9BVG4 233 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 WDR12Q9GZL7 423 aaKnown RBP11.96□□□□□ -0.49
COL1A1-205ENST00000476387 PTTG2Q9NZH5 202 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 U3KQE9 123 aa11.96□□□□□ -0.49
COL1A1-205ENST00000476387 FAM240BA0A1B0GVZ2 78 aa11.95□□□□□ -0.5
COL1A1-205ENST00000476387 SPRY2O43597 315 aa11.95□□□□□ -0.5
COL1A1-205ENST00000476387 AP2S1P53680 142 aaPredicted RBP11.95□□□□□ -0.5
COL1A1-205ENST00000476387 DEFB131AP59861 70 aa11.95□□□□□ -0.5
COL1A1-205ENST00000476387 DEFB135Q30KP9 77 aa11.95□□□□□ -0.5
COL1A1-205ENST00000476387 C16orf54Q6UWD8 224 aa11.95□□□□□ -0.5
COL1A1-205ENST00000476387 GLMPQ8WWB7 406 aa11.95□□□□□ -0.5
COL1A1-205ENST00000476387 PSENENQ9NZ42 101 aa11.95□□□□□ -0.5
COL1A1-205ENST00000476387 IGKV1D-37A0A075B6S9 117 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 K7EQG2 157 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 ATF4P18848 351 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-205ENST00000476387 LYZP61626 148 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 ZNF90Q03938 601 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 AKR1C1Q04828 323 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 ZNF846Q147U1 533 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 ZBTB8BQ8NAP8 495 aaPredicted RBP11.94□□□□□ -0.5
COL1A1-205ENST00000476387 TRGV9Q99603 122 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 GSKIPQ9P0R6 139 aa11.94□□□□□ -0.5
COL1A1-205ENST00000476387 SNRPGP15A8MWD9 76 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 PRSS46E5RG02 174 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 H2AFB2P0C5Z0 115 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 OR2F1Q13607 317 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 LEMD1Q68G75 181 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 SIGLEC15Q6ZMC9 328 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 ACOT7LQ6ZUV0 252 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 FAM24BQ8N5W8 94 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 THAP8Q8NA92 274 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 ZNF431Q8TF32 576 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-205ENST00000476387 PPP1R14BQ96C90 147 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 RNF183Q96D59 192 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 SEC22CQ9BRL7 303 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 AGRNO00468 2067 aa11.93□□□□□ -0.5
COL1A1-205ENST00000476387 HYDINQ4G0P3 5121 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 EPPK1P58107 5090 aaKnown RBP11.92□□□□□ -0.5
COL1A1-205ENST00000476387 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 SMCO3A2RU48 225 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 CCSO14618 274 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 BUB3O43684 328 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 CFDP00746 253 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-205ENST00000476387 ZNF688P0C7X2 276 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 ASAH1Q13510 395 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 STHQ8IWL8 128 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 ENKURQ8TC29 256 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 DCANP1Q8TF63 244 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 SMIM8Q96KF7 97 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 RAB40CQ96S21 281 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 CSTL1Q9H114 145 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
COL1A1-205ENST00000476387 ALMS1Q8TCU4 4167 aa11.91□□□□□ -0.5
COL1A1-205ENST00000476387 IGKV1OR2-108A0A075B7D4 117 aa11.91□□□□□ -0.5
COL1A1-205ENST00000476387 FAM25EA8MYX2 175 aa11.91□□□□□ -0.5
COL1A1-205ENST00000476387 NRN1Q9NPD7 142 aa11.91□□□□□ -0.5
COL1A1-205ENST00000476387 C5orf51A6NDU8 294 aa11.9□□□□□ -0.5
COL1A1-205ENST00000476387 CXorf65A6NEN9 183 aa11.9□□□□□ -0.5
COL1A1-205ENST00000476387 NUPR2A6NF83 97 aa11.9□□□□□ -0.5
COL1A1-205ENST00000476387 UPK1BO75841 260 aa11.9□□□□□ -0.5
COL1A1-205ENST00000476387 SNRPD3P62318 126 aaKnown RBP11.9□□□□□ -0.5
COL1A1-205ENST00000476387 C12orf45Q8N5I9 185 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-205ENST00000476387 TMEM217Q8N7C4 229 aa11.9□□□□□ -0.5
COL1A1-205ENST00000476387 BPIFCQ8NFQ6 507 aa11.9□□□□□ -0.5
COL1A1-205ENST00000476387 FBXL17Q9UF56 701 aa11.9□□□□□ -0.5
COL1A1-205ENST00000476387 RCL1Q9Y2P8 373 aaKnown RBP11.9□□□□□ -0.5
COL1A1-205ENST00000476387 BIRC6Q9NR09 4857 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms