RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ARL16Q0P5N6 197 aa22.34■■□□□ 1.17
HOXB3-208ENST00000476342 SLC25A31Q9H0C2 315 aa22.34■■□□□ 1.17
HOXB3-208ENST00000476342 NPPCP23582 126 aa22.33■■□□□ 1.17
HOXB3-208ENST00000476342 TMEM217Q8N7C4 229 aa22.33■■□□□ 1.17
HOXB3-208ENST00000476342 ASB13Q8WXK3 278 aa22.33■■□□□ 1.17
HOXB3-208ENST00000476342 PRR25Q96S07 402 aa22.33■■□□□ 1.17
HOXB3-208ENST00000476342 LILRB2Q8N423 598 aa22.32■■□□□ 1.16
HOXB3-208ENST00000476342 NARS2Q96I59 477 aaKnown RBP22.32■■□□□ 1.16
HOXB3-208ENST00000476342 RHPN1-AS1Q9BWJ2 59 aa22.32■■□□□ 1.16
HOXB3-208ENST00000476342 S100A11P31949 105 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 RBPMS2Q6ZRY4 209 aaKnown RBP22.31■■□□□ 1.16
HOXB3-208ENST00000476342 RNF125Q96EQ8 232 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 A0A1W2PS18 150 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 IZUMO1RA6ND01 250 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 CHEK1O14757 476 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 CFDP00746 253 aaPredicted RBP22.31■■□□□ 1.16
HOXB3-208ENST00000476342 LAMTOR1Q6IAA8 161 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 TEPPQ6URK8 271 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 TMEM61Q8N0U2 210 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 TMEM231Q9H6L2 316 aa22.31■■□□□ 1.16
HOXB3-208ENST00000476342 IGHV3-49A0A0A0MS15 119 aa22.3■■□□□ 1.16
HOXB3-208ENST00000476342 TRAV25A0A0B4J276 109 aa22.3■■□□□ 1.16
HOXB3-208ENST00000476342 WI2-2373I1.2A0A1W2PRP0 233 aa22.3■■□□□ 1.16
HOXB3-208ENST00000476342 GIPP09681 153 aaPredicted RBP22.3■■□□□ 1.16
HOXB3-208ENST00000476342 CRYBB3P26998 211 aa22.3■■□□□ 1.16
HOXB3-208ENST00000476342 RNF126Q9BV68 326 aa22.3■■□□□ 1.16
HOXB3-208ENST00000476342 MBD2Q9UBB5 411 aa22.3■■□□□ 1.16
HOXB3-208ENST00000476342 SELENOKQ9Y6D0 94 aa22.3■■□□□ 1.16
HOXB3-208ENST00000476342 EWSR1Q01844 656 aaKnown RBP eCLIP22.29■■□□□ 1.16
HOXB3-208ENST00000476342 BAXQ07812 192 aa22.29■■□□□ 1.16
HOXB3-208ENST00000476342 OR2F1Q13607 317 aa22.29■■□□□ 1.16
HOXB3-208ENST00000476342 USF2Q15853 346 aaPredicted RBP22.29■■□□□ 1.16
HOXB3-208ENST00000476342 BPIFCQ8NFQ6 507 aa22.29■■□□□ 1.16
HOXB3-208ENST00000476342 THAP6Q8TBB0 222 aa22.29■■□□□ 1.16
HOXB3-208ENST00000476342 RABAC1Q9UI14 185 aa22.29■■□□□ 1.16
HOXB3-208ENST00000476342 IGHV3OR16-13A0A075B7E8 117 aa22.28■■□□□ 1.16
HOXB3-208ENST00000476342 IGHV3-74A0A0B4J1X5 117 aa22.28■■□□□ 1.16
HOXB3-208ENST00000476342 HNRNPCP07910 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
HOXB3-208ENST00000476342 GUCA2BQ16661 112 aa22.28■■□□□ 1.16
HOXB3-208ENST00000476342 ATP6V1FQ16864 119 aa22.28■■□□□ 1.16
HOXB3-208ENST00000476342 PBDC1Q9BVG4 233 aa22.28■■□□□ 1.16
HOXB3-208ENST00000476342 VSIRQ9H7M9 311 aa22.28■■□□□ 1.16
HOXB3-208ENST00000476342 UQCC1Q9NVA1 299 aa22.28■■□□□ 1.16
HOXB3-208ENST00000476342 CD5P06127 495 aa22.27■■□□□ 1.16
HOXB3-208ENST00000476342 LYZP61626 148 aa22.27■■□□□ 1.16
HOXB3-208ENST00000476342 FGL1Q08830 312 aa22.27■■□□□ 1.16
HOXB3-208ENST00000476342 MRAPQ8TCY5 172 aa22.27■■□□□ 1.16
HOXB3-208ENST00000476342 ST8SIA2Q92186 375 aa22.27■■□□□ 1.16
HOXB3-208ENST00000476342 RNF2Q99496 336 aa22.27■■□□□ 1.16
HOXB3-208ENST00000476342 TMEM147Q9BVK8 224 aa22.27■■□□□ 1.16
HOXB3-208ENST00000476342 K7EIL1 84 aa22.26■■□□□ 1.15
HOXB3-208ENST00000476342 APOHP02749 345 aaPredicted RBP22.26■■□□□ 1.15
HOXB3-208ENST00000476342 RAP2BP61225 183 aa22.26■■□□□ 1.15
HOXB3-208ENST00000476342 SELENOTP62341 195 aa22.26■■□□□ 1.15
HOXB3-208ENST00000476342 CYP2G1PQ6ZSU1 146 aa22.26■■□□□ 1.15
HOXB3-208ENST00000476342 GTSCR1Q86UQ5 136 aa22.26■■□□□ 1.15
HOXB3-208ENST00000476342 GRAMD2BQ96HH9 432 aa22.26■■□□□ 1.15
HOXB3-208ENST00000476342 PFDN2Q9UHV9 154 aa22.26■■□□□ 1.15
HOXB3-208ENST00000476342 NHLH2Q02577 135 aa22.25■■□□□ 1.15
HOXB3-208ENST00000476342 LSM4Q9Y4Z0 139 aaKnown RBP22.25■■□□□ 1.15
HOXB3-208ENST00000476342 ZNF785A8K8V0 405 aa22.24■■□□□ 1.15
HOXB3-208ENST00000476342 TSPAN4O14817 238 aa22.24■■□□□ 1.15
HOXB3-208ENST00000476342 LYL1P12980 280 aa22.24■■□□□ 1.15
HOXB3-208ENST00000476342 NUP62P37198 522 aaPredicted RBP22.24■■□□□ 1.15
HOXB3-208ENST00000476342 VWC2Q2TAL6 325 aa22.24■■□□□ 1.15
HOXB3-208ENST00000476342 OR5C1Q8NGR4 320 aa22.24■■□□□ 1.15
HOXB3-208ENST00000476342 SPAG8Q99932 426 aaPredicted RBP22.24■■□□□ 1.15
HOXB3-208ENST00000476342 IGHV3-66A0A0C4DH42 116 aa22.23■■□□□ 1.15
HOXB3-208ENST00000476342 EIF2B2P49770 351 aaKnown RBP22.23■■□□□ 1.15
HOXB3-208ENST00000476342 RAB31Q13636 194 aa22.23■■□□□ 1.15
HOXB3-208ENST00000476342 U3KQE9 123 aa22.23■■□□□ 1.15
HOXB3-208ENST00000476342 GATA2P23769 480 aaPredicted RBP22.23■■□□□ 1.15
HOXB3-208ENST00000476342 RPL12P30050 165 aaKnown RBP22.23■■□□□ 1.15
HOXB3-208ENST00000476342 ZNF546Q86UE3 836 aa22.23■■□□□ 1.15
HOXB3-208ENST00000476342 UBE2L5PA0A1B0GUS4 154 aa22.22■■□□□ 1.15
HOXB3-208ENST00000476342 TCF24Q7RTU0 167 aa22.22■■□□□ 1.15
HOXB3-208ENST00000476342 WDR83OSQ9Y284 106 aa22.22■■□□□ 1.15
HOXB3-208ENST00000476342 AGPAT2O15120 278 aa22.21■■□□□ 1.15
HOXB3-208ENST00000476342 TMEM182Q6ZP80 229 aaPredicted RBP22.21■■□□□ 1.15
HOXB3-208ENST00000476342 HSPB11Q9Y547 144 aa22.21■■□□□ 1.15
HOXB3-208ENST00000476342 DFFBO76075 338 aa22.2■■□□□ 1.14
HOXB3-208ENST00000476342 LINC00869P0C866 280 aa22.2■■□□□ 1.14
HOXB3-208ENST00000476342 S100A7P31151 101 aa22.2■■□□□ 1.14
HOXB3-208ENST00000476342 DEFB121Q5J5C9 76 aa22.2■■□□□ 1.14
HOXB3-208ENST00000476342 FAM90A2PQ658T7 463 aa22.2■■□□□ 1.14
HOXB3-208ENST00000476342 PPP1R14BQ96C90 147 aa22.2■■□□□ 1.14
HOXB3-208ENST00000476342 SLC45A2Q9UMX9 530 aa22.2■■□□□ 1.14
HOXB3-208ENST00000476342 CLINT1Q14677 625 aa22.19■■□□□ 1.14
HOXB3-208ENST00000476342 OR2T35Q8NGX2 323 aa22.19■■□□□ 1.14
HOXB3-208ENST00000476342 MGST2Q99735 147 aa22.19■■□□□ 1.14
HOXB3-208ENST00000476342 BUB3O43684 328 aa22.18■■□□□ 1.14
HOXB3-208ENST00000476342 MPDU1O75352 247 aa22.18■■□□□ 1.14
HOXB3-208ENST00000476342 ORM2P19652 201 aa22.18■■□□□ 1.14
HOXB3-208ENST00000476342 CAMLGP49069 296 aa22.18■■□□□ 1.14
HOXB3-208ENST00000476342 CD81P60033 236 aa22.18■■□□□ 1.14
HOXB3-208ENST00000476342 RPL11P62913 178 aaKnown RBP22.18■■□□□ 1.14
HOXB3-208ENST00000476342 PAFAH1B2P68402 229 aa22.18■■□□□ 1.14
HOXB3-208ENST00000476342 C16orf54Q6UWD8 224 aa22.18■■□□□ 1.14
HOXB3-208ENST00000476342 SMAD5-AS1Q9Y6J3 95 aa22.18■■□□□ 1.14
HOXB3-208ENST00000476342 OR4C46A6NHA9 309 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms