RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 TMEM68Q96MH6 324 aa11.22□□□□□ -0.61
UBXN11-214ENST00000475591 MRPL18Q9H0U6 180 aaKnown RBP11.22□□□□□ -0.61
UBXN11-214ENST00000475591 GBGT1Q8N5D6 347 aa11.21□□□□□ -0.61
UBXN11-214ENST00000475591 SVIPQ8NHG7 77 aa11.21□□□□□ -0.61
UBXN11-214ENST00000475591 FAM168AQ92567 244 aa11.21□□□□□ -0.61
UBXN11-214ENST00000475591 BTF3L4Q96K17 158 aa11.21□□□□□ -0.61
UBXN11-214ENST00000475591 SSBP3Q9BWW4 388 aaPredicted RBP11.21□□□□□ -0.61
UBXN11-214ENST00000475591 SERTAD4Q9NUC0 356 aa11.21□□□□□ -0.61
UBXN11-214ENST00000475591 NCOR2Q9Y618 2525 aa11.21□□□□□ -0.62
UBXN11-214ENST00000475591 ISLRO14498 428 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 JOSD1Q15040 202 aaPredicted RBP11.2□□□□□ -0.62
UBXN11-214ENST00000475591 IBA57Q5T440 356 aaKnown RBP11.2□□□□□ -0.62
UBXN11-214ENST00000475591 TRGV9Q99603 122 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 VPS13CQ709C8 3753 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 SNURFLB1AK76 121 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 PEX7O00628 323 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 HTR1DP28221 377 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 CDKN1AP38936 164 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 MRPL41Q8IXM3 137 aaKnown RBP11.2□□□□□ -0.62
UBXN11-214ENST00000475591 PERPQ96FX8 193 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 TIMD4Q96H15 378 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 CDC42EP3Q9UKI2 254 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
UBXN11-214ENST00000475591 F2Z2F3 143 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 CNIH1O95406 144 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 C22orf15Q8WYQ4 148 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 WNT10AQ9GZT5 417 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 PPP1R14DQ9NXH3 145 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 LOC105371242A0A075B767 164 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 CFHR4Q92496 578 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 DPM3Q9P2X0 92 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 S4R3C0 116 aa11.19□□□□□ -0.62
UBXN11-214ENST00000475591 I3L2K1 104 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 HYPMO75409 117 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 PRB4P10163 310 aaPredicted RBP11.18□□□□□ -0.62
UBXN11-214ENST00000475591 PSG1P11464 419 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 MYCNOSP40205 109 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 LINC00310P59036 64 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 LYZP61626 148 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 KLF17Q5JT82 389 aaPredicted RBP11.18□□□□□ -0.62
UBXN11-214ENST00000475591 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 MRPL54Q6P161 138 aaKnown RBP11.18□□□□□ -0.62
UBXN11-214ENST00000475591 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 PGPA6NDG6 321 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 ZNF705GA8MUZ8 300 aaPredicted RBP11.18□□□□□ -0.62
UBXN11-214ENST00000475591 SLC25A5P05141 298 aaKnown RBP11.18□□□□□ -0.62
UBXN11-214ENST00000475591 IGLC1P0CG04 106 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 DYNAPQ8N1N2 210 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 OR11H6Q8NGC7 330 aa11.18□□□□□ -0.62
UBXN11-214ENST00000475591 TRAV9-1A0A075B6T8 112 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 NBEAP1P0C6P0 100 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 GP9P14770 177 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 HES1Q14469 280 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 SSX2Q16385 188 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 KIAA1644Q3SXP7 199 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 CORTO00230 105 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 NBR2O15453 112 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 CD33P20138 364 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 TAS2R60P59551 318 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 CX3CL1P78423 397 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 OR5R1Q8NH85 324 aa11.17□□□□□ -0.62
UBXN11-214ENST00000475591 SPTBN1Q01082 2364 aaKnown RBP11.17□□□□□ -0.62
UBXN11-214ENST00000475591 ZFP36P26651 326 aaKnown RBP11.16□□□□□ -0.62
UBXN11-214ENST00000475591 EPDR1Q9UM22 224 aa11.16□□□□□ -0.62
UBXN11-214ENST00000475591 SMIM27A0A1W2PRY6 76 aa11.16□□□□□ -0.62
UBXN11-214ENST00000475591 ODF3BA8MYP8 253 aa11.16□□□□□ -0.62
UBXN11-214ENST00000475591 K7EIM0 57 aa11.16□□□□□ -0.62
UBXN11-214ENST00000475591 TOX4O94842 621 aa11.16□□□□□ -0.62
UBXN11-214ENST00000475591 CRISP2P16562 243 aa11.16□□□□□ -0.62
UBXN11-214ENST00000475591 NAT8BQ9UHF3 227 aa11.16□□□□□ -0.62
UBXN11-214ENST00000475591 COL12A1Q99715 3063 aa11.16□□□□□ -0.62
UBXN11-214ENST00000475591 SERF1AO75920 110 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 IGKV1-17P01599 117 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 RAB4BP61018 213 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 MAJINQ3KP22 176 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 TMEM136Q6ZRR5 245 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 VMO1Q7Z5L0 202 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 NEU4Q8WWR8 484 aaPredicted RBP11.15□□□□□ -0.62
UBXN11-214ENST00000475591 HIGD1AQ9Y241 93 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 HIVEP3Q5T1R4 2406 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 PRTN3P24158 256 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 UQCRFS1P47985 274 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 PRR31Q5SQ13 230 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 DNLZQ5SXM8 178 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 Q71RC1 249 aaPredicted RBP11.15□□□□□ -0.62
UBXN11-214ENST00000475591 NUDT10Q8NFP7 164 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 NUDT11Q96G61 164 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 RNF5Q99942 180 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 RASL11BQ9BPW5 248 aa11.15□□□□□ -0.62
UBXN11-214ENST00000475591 M0R1W7 72 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 PAX2Q02962 417 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 KIR3DL3Q8N743 410 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 STXBP6Q8NFX7 210 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 CMTM2Q8TAZ6 248 aa11.14□□□□□ -0.63
UBXN11-214ENST00000475591 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms