RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 RND2P52198 227 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 TCTAP57738 103 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 RAB11AP62491 216 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 ZNF600Q6ZNG1 722 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
ATG9A-220ENST00000475339 SLC16A13Q7RTY0 426 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 ZNF431Q8TF32 576 aaPredicted RBP10.36□□□□□ -0.75
ATG9A-220ENST00000475339 ACY3Q96HD9 319 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 SEC22CQ9BRL7 303 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 MLXQ9UH92 298 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 SELENOKQ9Y6D0 94 aa10.36□□□□□ -0.75
ATG9A-220ENST00000475339 TRAV30A0A087WSZ9 112 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 K7EMT4 169 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 TMEM50AO95807 157 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 NKX2-1P43699 371 aaPredicted RBP10.35□□□□□ -0.75
ATG9A-220ENST00000475339 MLANAQ16655 118 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 IAH1Q2TAA2 248 aaPredicted RBP10.35□□□□□ -0.75
ATG9A-220ENST00000475339 PRSS54Q6PEW0 395 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 OR1S2Q8NGQ3 325 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 SLC35E1Q96K37 410 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 SCRT2Q9NQ03 307 aa10.35□□□□□ -0.75
ATG9A-220ENST00000475339 PUS1Q9Y606 427 aaKnown RBP eCLIP10.35□□□□□ -0.75
ATG9A-220ENST00000475339 MPTX1A8MV57 137 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 FAM25EA8MYX2 175 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 IGLL5B9A064 214 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 M0R2N4 97 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 SSSCA1O60232 199 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 SCAF4O95104 1147 aaKnown RBP10.34□□□□□ -0.75
ATG9A-220ENST00000475339 C8orf88P0DMB2 117 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 OR10J1P30954 320 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
ATG9A-220ENST00000475339 LAMTOR1Q6IAA8 161 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 TMEM61Q8N0U2 210 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 GPN1Q9HCN4 374 aaPredicted RBP10.34□□□□□ -0.75
ATG9A-220ENST00000475339 MRPL36Q9P0J6 103 aaKnown RBP10.34□□□□□ -0.75
ATG9A-220ENST00000475339 GSKIPQ9P0R6 139 aa10.34□□□□□ -0.75
ATG9A-220ENST00000475339 TRAV14DV4A0A0A6YYC5 116 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 TRAV25A0A0B4J276 109 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 IGHV7-4-1A0A0J9YVY3 117 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 C5orf51A6NDU8 294 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 IFITM3Q01628 133 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 TIGITQ495A1 244 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 SPANXN5Q5MJ07 72 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 TOMM20LQ6UXN7 152 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 C12orf45Q8N5I9 185 aaPredicted RBP10.33□□□□□ -0.76
ATG9A-220ENST00000475339 ZBTB8BQ8NAP8 495 aaPredicted RBP10.33□□□□□ -0.76
ATG9A-220ENST00000475339 TMEM116Q8NCL8 245 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 OR4D5Q8NGN0 318 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 NPIPB3Q92617 1050 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 OR10C1Q96KK4 312 aa10.33□□□□□ -0.76
ATG9A-220ENST00000475339 STRAPQ9Y3F4 350 aaKnown RBP10.33□□□□□ -0.76
ATG9A-220ENST00000475339 IGHV3-49A0A0A0MS15 119 aa10.32□□□□□ -0.76
ATG9A-220ENST00000475339 H3BP45 60 aa10.32□□□□□ -0.76
ATG9A-220ENST00000475339 CCSO14618 274 aa10.32□□□□□ -0.76
ATG9A-220ENST00000475339 IGLC1P0CG04 106 aa10.32□□□□□ -0.76
ATG9A-220ENST00000475339 GPX4P36969 197 aaPredicted RBP10.32□□□□□ -0.76
ATG9A-220ENST00000475339 POLR2GP62487 172 aaKnown RBP eCLIP10.32□□□□□ -0.76
ATG9A-220ENST00000475339 NRARPQ7Z6K4 114 aa10.32□□□□□ -0.76
ATG9A-220ENST00000475339 NARS2Q96I59 477 aaKnown RBP10.32□□□□□ -0.76
ATG9A-220ENST00000475339 MFFQ9GZY8 342 aa10.32□□□□□ -0.76
ATG9A-220ENST00000475339 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
ATG9A-220ENST00000475339 ZFP92A6NM28 416 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 IGKV1-17P01599 117 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 IL5P05113 134 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 APOC4P55056 127 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 ID3Q02535 119 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 Q8WTZ3 238 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 METTL26Q96S19 204 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 SPAG8Q99932 426 aaPredicted RBP10.31□□□□□ -0.76
ATG9A-220ENST00000475339 RHPN1-AS1Q9BWJ2 59 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 TMEM231Q9H6L2 316 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 ZFAND3Q9H8U3 227 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 PSENENQ9NZ42 101 aa10.31□□□□□ -0.76
ATG9A-220ENST00000475339 IGHV3OR16-13A0A075B7E8 117 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 IGHV3-74A0A0B4J1X5 117 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 C16orf90A8MZG2 172 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 INMT-MINDY4F8WBC2 141 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 L7N2F9 121 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 CHEK1O14757 476 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 PRAF2O60831 178 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 FABP1P07148 127 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 NPPCP23582 126 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 YPEL3P61236 119 aaPredicted RBP10.3□□□□□ -0.76
ATG9A-220ENST00000475339 VAMP2P63027 116 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 RAB40CQ96S21 281 aa10.3□□□□□ -0.76
ATG9A-220ENST00000475339 A0A1W2PS18 150 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 OR4C46A6NHA9 309 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 UBE2CO00762 179 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 TSPAN4O14817 238 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 IL4P05112 153 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 RD3LP0DJH9 198 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 AKR1C1Q04828 323 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 GAMTQ14353 236 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 GSG1LQ6UXU4 331 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 ZNF414Q96IQ9 312 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 RNF2Q99496 336 aa10.29□□□□□ -0.76
ATG9A-220ENST00000475339 IGHV3-66A0A0C4DH42 116 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms