RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 U3KQE9 123 aa17.79■□□□□ 0.44
CPNE1-223ENST00000475146 IGKV1D-37A0A075B6S9 117 aa17.78■□□□□ 0.44
CPNE1-223ENST00000475146 SSSCA1O60232 199 aa17.78■□□□□ 0.44
CPNE1-223ENST00000475146 FABP1P07148 127 aa17.78■□□□□ 0.44
CPNE1-223ENST00000475146 LYL1P12980 280 aa17.78■□□□□ 0.44
CPNE1-223ENST00000475146 ZNF90Q03938 601 aa17.78■□□□□ 0.44
CPNE1-223ENST00000475146 RNF125Q96EQ8 232 aa17.78■□□□□ 0.44
CPNE1-223ENST00000475146 FAM240BA0A1B0GVZ2 78 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 HELTA6NFD8 242 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 DEFB131AP59861 70 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 MZT2BQ6NZ67 158 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 C16orf54Q6UWD8 224 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 FAM24BQ8N5W8 94 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 STPG3Q8N7X2 389 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 WDR12Q9GZL7 423 aaKnown RBP17.77■□□□□ 0.44
CPNE1-223ENST00000475146 PSENENQ9NZ42 101 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 GSKIPQ9P0R6 139 aa17.77■□□□□ 0.44
CPNE1-223ENST00000475146 KIR2DL5BA0A0G2JN68 375 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 KIR2DL5BA0A0G2JPC4 375 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 UBE2CO00762 179 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 H2AFB2P0C5Z0 115 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 LYZP61626 148 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 OR2F1Q13607 317 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 ZNF846Q147U1 533 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 KIR2DL5AQ8N109 375 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 ZBTB8BQ8NAP8 495 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-223ENST00000475146 KIR2DL5BQ8NHK3 375 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 GLMPQ8WWB7 406 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 TRGV9Q99603 122 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 SEC22CQ9BRL7 303 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 OVOL2Q9BRP0 275 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 TBC1D24Q9ULP9 559 aa17.76■□□□□ 0.43
CPNE1-223ENST00000475146 PRSS46E5RG02 174 aa17.75■□□□□ 0.43
CPNE1-223ENST00000475146 K7EQG2 157 aa17.75■□□□□ 0.43
CPNE1-223ENST00000475146 CCSO14618 274 aa17.75■□□□□ 0.43
CPNE1-223ENST00000475146 DEFB135Q30KP9 77 aa17.75■□□□□ 0.43
CPNE1-223ENST00000475146 CASC10Q5T4H9 136 aa17.75■□□□□ 0.43
CPNE1-223ENST00000475146 LEMD1Q68G75 181 aa17.75■□□□□ 0.43
CPNE1-223ENST00000475146 ZFAND6Q6FIF0 208 aa17.75■□□□□ 0.43
CPNE1-223ENST00000475146 ACOT7LQ6ZUV0 252 aa17.75■□□□□ 0.43
CPNE1-223ENST00000475146 ZNF431Q8TF32 576 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-223ENST00000475146 NUP62P37198 522 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-223ENST00000475146 AKR1C1Q04828 323 aa17.74■□□□□ 0.43
CPNE1-223ENST00000475146 ASAH1Q13510 395 aa17.74■□□□□ 0.43
CPNE1-223ENST00000475146 Q6ZWC4 215 aa17.74■□□□□ 0.43
CPNE1-223ENST00000475146 THAP8Q8NA92 274 aa17.74■□□□□ 0.43
CPNE1-223ENST00000475146 PFDN2Q9UHV9 154 aa17.74■□□□□ 0.43
CPNE1-223ENST00000475146 SNRPGP15A8MWD9 76 aa17.73■□□□□ 0.43
CPNE1-223ENST00000475146 FAM25EA8MYX2 175 aa17.73■□□□□ 0.43
CPNE1-223ENST00000475146 BUB3O43684 328 aa17.73■□□□□ 0.43
CPNE1-223ENST00000475146 ZNF688P0C7X2 276 aa17.73■□□□□ 0.43
CPNE1-223ENST00000475146 AP2S1P53680 142 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-223ENST00000475146 OR8G2PQ6IF36 304 aa17.73■□□□□ 0.43
CPNE1-223ENST00000475146 SMIM8Q96KF7 97 aa17.73■□□□□ 0.43
CPNE1-223ENST00000475146 IGKV1OR2-108A0A075B7D4 117 aa17.72■□□□□ 0.43
CPNE1-223ENST00000475146 SMCO3A2RU48 225 aa17.72■□□□□ 0.43
CPNE1-223ENST00000475146 SPRY2O43597 315 aa17.72■□□□□ 0.43
CPNE1-223ENST00000475146 UPK1BO75841 260 aa17.72■□□□□ 0.43
CPNE1-223ENST00000475146 DCANP1Q8TF63 244 aa17.72■□□□□ 0.43
CPNE1-223ENST00000475146 RAB40CQ96S21 281 aa17.72■□□□□ 0.43
CPNE1-223ENST00000475146 TP53TG1Q9Y2A0 90 aa17.72■□□□□ 0.43
CPNE1-223ENST00000475146 SIGLEC15Q6ZMC9 328 aa17.71■□□□□ 0.43
CPNE1-223ENST00000475146 C12orf45Q8N5I9 185 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-223ENST00000475146 ENKURQ8TC29 256 aa17.71■□□□□ 0.43
CPNE1-223ENST00000475146 PPP1R14BQ96C90 147 aa17.71■□□□□ 0.43
CPNE1-223ENST00000475146 CSTL1Q9H114 145 aa17.71■□□□□ 0.43
CPNE1-223ENST00000475146 RCL1Q9Y2P8 373 aaKnown RBP17.71■□□□□ 0.43
CPNE1-223ENST00000475146 NBEAL2Q6ZNJ1 2754 aa17.7■□□□□ 0.42
CPNE1-223ENST00000475146 C5orf51A6NDU8 294 aa17.7■□□□□ 0.42
CPNE1-223ENST00000475146 MBPP02686 304 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-223ENST00000475146 METTL15P1P0C7V9 234 aa17.69■□□□□ 0.42
CPNE1-223ENST00000475146 PAX9P55771 341 aa17.69■□□□□ 0.42
CPNE1-223ENST00000475146 STHQ8IWL8 128 aa17.69■□□□□ 0.42
CPNE1-223ENST00000475146 NRN1Q9NPD7 142 aa17.69■□□□□ 0.42
CPNE1-223ENST00000475146 BATF3Q9NR55 127 aa17.69■□□□□ 0.42
CPNE1-223ENST00000475146 TSC22D2O75157 780 aa17.68■□□□□ 0.42
CPNE1-223ENST00000475146 CCNKO75909 580 aa17.68■□□□□ 0.42
CPNE1-223ENST00000475146 TAS2R30P59541 319 aa17.68■□□□□ 0.42
CPNE1-223ENST00000475146 TMEM14EPQ6UXP3 125 aa17.68■□□□□ 0.42
CPNE1-223ENST00000475146 RNF183Q96D59 192 aa17.68■□□□□ 0.42
CPNE1-223ENST00000475146 PMS2P5A8MQ11 134 aa17.67■□□□□ 0.42
CPNE1-223ENST00000475146 L7N2F9 121 aa17.67■□□□□ 0.42
CPNE1-223ENST00000475146 CFDP00746 253 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-223ENST00000475146 RRAS2P62070 204 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-223ENST00000475146 VAMP2P63027 116 aa17.67■□□□□ 0.42
CPNE1-223ENST00000475146 PSMG4Q5JS54 123 aa17.67■□□□□ 0.42
CPNE1-223ENST00000475146 TMEM144Q7Z5S9 345 aa17.67■□□□□ 0.42
CPNE1-223ENST00000475146 BPIFCQ8NFQ6 507 aa17.67■□□□□ 0.42
CPNE1-223ENST00000475146 IL17DQ8TAD2 202 aa17.67■□□□□ 0.42
CPNE1-223ENST00000475146 LSM5Q9Y4Y9 91 aaKnown RBP17.67■□□□□ 0.42
CPNE1-223ENST00000475146 KNCNA6PVL3 124 aa17.66■□□□□ 0.42
CPNE1-223ENST00000475146 CA1P00915 261 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-223ENST00000475146 GATA2P23769 480 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-223ENST00000475146 SNRPD3P62318 126 aaKnown RBP17.66■□□□□ 0.42
CPNE1-223ENST00000475146 DLK1P80370 383 aa17.66■□□□□ 0.42
CPNE1-223ENST00000475146 OR10P1Q8NGE3 313 aa17.66■□□□□ 0.42
CPNE1-223ENST00000475146 FBXL17Q9UF56 701 aa17.66■□□□□ 0.42
CPNE1-223ENST00000475146 C7orf66A4D0T2 115 aa17.65■□□□□ 0.42
CPNE1-223ENST00000475146 IFITM3Q01628 133 aa17.65■□□□□ 0.42
CPNE1-223ENST00000475146 C1orf194Q5T5A4 169 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms