RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 LRTM2Q8N967 370 aa13.39□□□□□ -0.27
DNMT3A-210ENST00000474807 C11orf45Q8TAV5 145 aa13.39□□□□□ -0.27
DNMT3A-210ENST00000474807 DEDD2Q8WXF8 326 aa13.39□□□□□ -0.27
DNMT3A-210ENST00000474807 IGKV1D-37A0A075B6S9 117 aa13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 IFNA4P05014 189 aa13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 C4BPBP20851 252 aa13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 GPX4P36969 197 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 GAMTQ14353 236 aa13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 TMEM41BQ5BJD5 291 aa13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 OR51G1Q8NGK1 321 aa13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 RNF125Q96EQ8 232 aa13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 SLC25A21Q9BQT8 299 aaPredicted RBP13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 MFFQ9GZY8 342 aa13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 RBM38Q9H0Z9 239 aaKnown RBP13.38□□□□□ -0.27
DNMT3A-210ENST00000474807 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 DEFB4AO15263 64 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 SLC25A6P12236 298 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 S100A5P33763 92 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 PSMG4Q5JS54 123 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 ACTL10Q5JWF8 245 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 SIGLEC15Q6ZMC9 328 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 Q8NAQ8 132 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 RAB40CQ96S21 281 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 SEPSECSQ9HD40 501 aaKnown RBP13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 NRN1Q9NPD7 142 aa13.37□□□□□ -0.27
DNMT3A-210ENST00000474807 DNAH6Q9C0G6 4158 aa13.36□□□□□ -0.27
DNMT3A-210ENST00000474807 ZNF705EA8MWA4 302 aaPredicted RBP13.36□□□□□ -0.27
DNMT3A-210ENST00000474807 FAM90A26D6RGX4 464 aa13.36□□□□□ -0.27
DNMT3A-210ENST00000474807 VAMP1P23763 118 aa13.36□□□□□ -0.27
DNMT3A-210ENST00000474807 ZNF90Q03938 601 aa13.36□□□□□ -0.27
DNMT3A-210ENST00000474807 CSNK1G2-AS1Q8NCQ2 148 aa13.36□□□□□ -0.27
DNMT3A-210ENST00000474807 TMED3Q9Y3Q3 217 aa13.36□□□□□ -0.27
DNMT3A-210ENST00000474807 ZFP92A6NM28 416 aa13.35□□□□□ -0.27
DNMT3A-210ENST00000474807 SFT2D2O95562 160 aa13.35□□□□□ -0.27
DNMT3A-210ENST00000474807 PPP1R1AQ13522 171 aa13.35□□□□□ -0.27
DNMT3A-210ENST00000474807 SLC35E1Q96K37 410 aa13.35□□□□□ -0.27
DNMT3A-210ENST00000474807 FBXL17Q9UF56 701 aa13.35□□□□□ -0.27
DNMT3A-210ENST00000474807 X6R8D5 127 aa13.35□□□□□ -0.27
DNMT3A-210ENST00000474807 RBMY1A1P0DJD3 496 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-210ENST00000474807 RBMY1CP0DJD4 496 aa13.34□□□□□ -0.27
DNMT3A-210ENST00000474807 IAPPP10997 89 aa13.34□□□□□ -0.27
DNMT3A-210ENST00000474807 SNRPD3P62318 126 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-210ENST00000474807 RAB11AP62491 216 aa13.34□□□□□ -0.27
DNMT3A-210ENST00000474807 RBMY1FQ15415 496 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-210ENST00000474807 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
DNMT3A-210ENST00000474807 PBDC1Q9BVG4 233 aa13.34□□□□□ -0.27
DNMT3A-210ENST00000474807 IGHV4-28A0A0C4DH34 117 aa13.33□□□□□ -0.28
DNMT3A-210ENST00000474807 MIFP14174 115 aa13.33□□□□□ -0.28
DNMT3A-210ENST00000474807 NUP62P37198 522 aaPredicted RBP13.33□□□□□ -0.28
DNMT3A-210ENST00000474807 CENPSQ8N2Z9 138 aa13.33□□□□□ -0.28
DNMT3A-210ENST00000474807 SRRQ9GZT4 340 aa13.33□□□□□ -0.28
DNMT3A-210ENST00000474807 HRH4Q9H3N8 390 aa13.33□□□□□ -0.28
DNMT3A-210ENST00000474807 CLEC5AQ9NY25 188 aa13.33□□□□□ -0.28
DNMT3A-210ENST00000474807 IGKV1OR2-108A0A075B7D4 117 aa13.32□□□□□ -0.28
DNMT3A-210ENST00000474807 ZNF701M0R085 212 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-210ENST00000474807 MED6O75586 246 aa13.32□□□□□ -0.28
DNMT3A-210ENST00000474807 LGALS9CQ6DKI2 356 aa13.32□□□□□ -0.28
DNMT3A-210ENST00000474807 TRGV9Q99603 122 aa13.32□□□□□ -0.28
DNMT3A-210ENST00000474807 PFDN2Q9UHV9 154 aa13.32□□□□□ -0.28
DNMT3A-210ENST00000474807 SNRPGP15A8MWD9 76 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 PRSS46E5RG02 174 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 H3BMM0 161 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 SYNGR2O43760 224 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 FABP1P07148 127 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 HOXB5P09067 269 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 SPANXN2Q5MJ10 180 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 THAP8Q8NA92 274 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 CIB3Q96Q77 187 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 MAGT1Q9H0U3 335 aa13.31□□□□□ -0.28
DNMT3A-210ENST00000474807 NKX2-1P43699 371 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 UBE2MP61081 183 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 LYZP61626 148 aa13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 BAK1Q16611 211 aa13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 C1orf194Q5T5A4 169 aa13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 GGNBP1Q5YKI7 109 aa13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 C2CD4CQ8TF44 421 aa13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 TBC1D24Q9ULP9 559 aa13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 PAIP2BQ9ULR5 123 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-210ENST00000474807 DNAH2Q9P225 4427 aa13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 ELOA3CA0A087WX78 387 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 WRBO00258 174 aa13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 SOCS3O14543 225 aa13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 HLA-DRB4P13762 266 aa13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 NUTF2P61970 127 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 RPP30P78346 268 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 OR2F1Q13607 317 aa13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 RPP25LQ8N5L8 163 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 C1QTNF4Q9BXJ3 329 aa13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 HLA-DRB4X5D2U9 266 aa13.29□□□□□ -0.28
DNMT3A-210ENST00000474807 C9orf170A2RU37 121 aa13.28□□□□□ -0.28
DNMT3A-210ENST00000474807 C11orf94C9JXX5 98 aa13.28□□□□□ -0.28
DNMT3A-210ENST00000474807 NDUFB6O95139 128 aa13.28□□□□□ -0.28
DNMT3A-210ENST00000474807 TCTAP57738 103 aa13.28□□□□□ -0.28
DNMT3A-210ENST00000474807 GDF5OSQ5U4N7 250 aa13.28□□□□□ -0.28
DNMT3A-210ENST00000474807 NAP1L6A6NFF2 107 aa13.27□□□□□ -0.29
DNMT3A-210ENST00000474807 DEDDO75618 318 aa13.27□□□□□ -0.29
DNMT3A-210ENST00000474807 ADAP1O75689 374 aa13.27□□□□□ -0.29
DNMT3A-210ENST00000474807 CFDP00746 253 aaPredicted RBP13.27□□□□□ -0.29
DNMT3A-210ENST00000474807 HLA-DMBP28068 263 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms