RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 H2AFB2P0C5Z0 115 aa10.11□□□□□ -0.79
CCDC78-209ENST00000474647 ANXA7P20073 488 aaKnown RBP10.11□□□□□ -0.79
CCDC78-209ENST00000474647 UCP1P25874 307 aa10.11□□□□□ -0.79
CCDC78-209ENST00000474647 P2RY1P47900 373 aa10.11□□□□□ -0.79
CCDC78-209ENST00000474647 PPP1R1AQ13522 171 aa10.11□□□□□ -0.79
CCDC78-209ENST00000474647 GRAMD2BQ96HH9 432 aa10.11□□□□□ -0.79
CCDC78-209ENST00000474647 NARS2Q96I59 477 aaKnown RBP10.11□□□□□ -0.79
CCDC78-209ENST00000474647 MARVELD1Q9BSK0 173 aa10.11□□□□□ -0.79
CCDC78-209ENST00000474647 DYNC1H1Q14204 4646 aaKnown RBP10.1□□□□□ -0.79
CCDC78-209ENST00000474647 IFNA17P01571 189 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 AMBPP02760 352 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 OR5AC1P0C628 307 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 OR4E1P0C645 316 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 P0DMU3 169 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 FAM231AP0DMU4 169 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 FAM231CP0DMU5 169 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 ANXA3P12429 323 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 OPRK1P41145 380 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 HOXA1P49639 335 aaPredicted RBP10.1□□□□□ -0.79
CCDC78-209ENST00000474647 POM121L12Q8N7R1 296 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 PDCD10Q9BUL8 212 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 TMEM222Q9H0R3 208 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 KCNIP3Q9Y2W7 256 aa10.1□□□□□ -0.79
CCDC78-209ENST00000474647 CORTO00230 105 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 SFT2D2O95562 160 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 VAMP1P23763 118 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 AKR1C2P52895 323 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 SUB1P53999 127 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC78-209ENST00000474647 DHRS2Q13268 280 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 OXA1LQ15070 435 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 C12orf74Q32Q52 190 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 SP6Q3SY56 376 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 PSMG4Q5JS54 123 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 GLYATL2Q8WU03 294 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 SCRT1Q9BWW7 348 aa10.09□□□□□ -0.79
CCDC78-209ENST00000474647 MRPL36Q9P0J6 103 aaKnown RBP10.09□□□□□ -0.79
CCDC78-209ENST00000474647 ABCA13Q86UQ4 5058 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 C9orf170A2RU37 121 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 INMT-MINDY4F8WBC2 141 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 RTL8CO15255 209 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 PRAF2O60831 178 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 PFDN1O60925 122 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 CLN5O75503 358 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 IL5P05113 134 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 CRYBB3P26998 211 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 EIF2B2P49770 351 aaKnown RBP10.08□□□□□ -0.8
CCDC78-209ENST00000474647 TRIM16LQ309B1 348 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 C4orf46Q504U0 113 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 CSNK1G2-AS1Q8NCQ2 148 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 DCANP1Q8TF63 244 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 IL22RA2Q969J5 263 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 ENY2Q9NPA8 101 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 TMEM56-RWDD3S4R434 201 aa10.08□□□□□ -0.8
CCDC78-209ENST00000474647 HELTA6NFD8 242 aa10.07□□□□□ -0.8
CCDC78-209ENST00000474647 CDS2O95674 445 aa10.07□□□□□ -0.8
CCDC78-209ENST00000474647 RNASE2P10153 161 aaKnown RBP10.07□□□□□ -0.8
CCDC78-209ENST00000474647 SRPXP78539 464 aa10.07□□□□□ -0.8
CCDC78-209ENST00000474647 TIGITQ495A1 244 aa10.07□□□□□ -0.8
CCDC78-209ENST00000474647 UBE2DNLQ8IWF7 75 aa10.07□□□□□ -0.8
CCDC78-209ENST00000474647 LRTM2Q8N967 370 aa10.07□□□□□ -0.8
CCDC78-209ENST00000474647 LHFPL5Q8TAF8 219 aa10.07□□□□□ -0.8
CCDC78-209ENST00000474647 RBPMSQ93062 196 aaKnown RBP10.07□□□□□ -0.8
CCDC78-209ENST00000474647 FNDC4Q9H6D8 234 aaPredicted RBP10.07□□□□□ -0.8
CCDC78-209ENST00000474647 XCL2Q9UBD3 114 aa10.07□□□□□ -0.8
CCDC78-209ENST00000474647 PIGBOS1A0A0B4J2F0 54 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 ATG12O94817 140 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 IGKV1-5P01602 117 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 NPY1RP25929 384 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 MLANAQ16655 118 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 SELENOHQ8IZQ5 122 aaKnown RBP10.06□□□□□ -0.8
CCDC78-209ENST00000474647 LGI3Q8N145 548 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 RNASE11Q8TAA1 199 aaKnown RBP10.06□□□□□ -0.8
CCDC78-209ENST00000474647 ZNF431Q8TF32 576 aaPredicted RBP10.06□□□□□ -0.8
CCDC78-209ENST00000474647 MITD1Q8WV92 249 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 RAB40CQ96S21 281 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 SEC22CQ9BRL7 303 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 C1QTNF4Q9BXJ3 329 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 PRR13Q9NZ81 148 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 DNAH11Q96DT5 4516 aa10.06□□□□□ -0.8
CCDC78-209ENST00000474647 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 A0A0B4J293 547 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 A0A0B4J2A0 478 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 DUXBA0A1W2PPF3 345 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 IFNA10P01566 189 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 P0C879 139 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 BCAP31P51572 246 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 EMP1P54849 157 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 NUTF2P61970 127 aaKnown RBP10.05□□□□□ -0.8
CCDC78-209ENST00000474647 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 OR4X1Q8NH49 305 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 COQ8AQ8NI60 647 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 GPN1Q9HCN4 374 aaPredicted RBP10.05□□□□□ -0.8
CCDC78-209ENST00000474647 SHPKQ9UHJ6 478 aa10.05□□□□□ -0.8
CCDC78-209ENST00000474647 C7orf66A4D0T2 115 aa10.04□□□□□ -0.8
CCDC78-209ENST00000474647 SNRPGP15A8MWD9 76 aa10.04□□□□□ -0.8
CCDC78-209ENST00000474647 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
CCDC78-209ENST00000474647 IFNA21P01568 189 aa10.04□□□□□ -0.8
CCDC78-209ENST00000474647 HNRNPCP07910 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms