RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 IFNA1P01562 189 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 IGLC1P0CG04 106 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 B2MP61769 119 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 TIGITQ495A1 244 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 C12orf54Q6X4T0 127 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 IL34Q6ZMJ4 242 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 C3orf56Q8N813 242 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 KLHL30-AS1Q8NEE0 82 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 OR10G4Q8NGN3 311 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 OR10G9Q8NGN4 311 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 OR10G7Q8NGN6 311 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 OR5B12Q96R08 314 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 MGST2Q99735 147 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 GGTLC1Q9BX51 225 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 TREM1Q9NP99 234 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 PXMP4Q9Y6I8 212 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 ZNF320A2RRD8 509 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 NDUFA4O00483 81 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 HYPMO75409 117 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 CTSGP08311 255 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 OR5G3P0C626 314 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 LINC00869P0C866 280 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 CD28P10747 220 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 M6PRP20645 277 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 CDC34P49427 236 aaPredicted RBP8.02□□□□□ -1.13
COL12A1-206ENST00000474564 RHOBP62745 196 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 SRSF2Q01130 221 aaKnown RBP8.02□□□□□ -1.13
COL12A1-206ENST00000474564 DEFA5Q01523 94 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 AWAT1Q58HT5 328 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 MIC13Q5XKP0 118 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 C10orf99Q6UWK7 81 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 LCNL1Q6ZST4 164 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 NDUFA11Q86Y39 141 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 STPG3Q8N7X2 389 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 C11orf44Q8N8P7 122 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 OR1N2Q8NGR9 330 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 MYOZ3Q8TDC0 251 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 GATAD1Q8WUU5 269 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 SFT2D1Q8WV19 159 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 MARC2Q969Z3 335 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 GRAMD2BQ96HH9 432 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 METTL26Q96S19 204 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 EIF5A2Q9GZV4 153 aaKnown RBP8.02□□□□□ -1.13
COL12A1-206ENST00000474564 SLC25A22Q9H936 323 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 DNAJC4Q9NNZ3 241 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 SLC45A2Q9UMX9 530 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 RFNGQ9Y644 331 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 F8P00451 2351 aa8.02□□□□□ -1.13
COL12A1-206ENST00000474564 TLN2Q9Y4G6 2542 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 SONP18583 2426 aaKnown RBP8.01□□□□□ -1.13
COL12A1-206ENST00000474564 CTXND1A0A1B0GTU2 59 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 A0A1W2PS18 150 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 MAP1LC3B2A6NCE7 125 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 LINC01619G3V211 115 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 M0QZ24 198 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 PSG1P11464 419 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 ORM2P19652 201 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 NPPCP23582 126 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 TAS2R45P59539 299 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 LYZP61626 148 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 ZNF90Q03938 601 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 C10orf113Q5VZT2 155 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 LCN15Q6UWW0 184 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 GPHB5Q86YW7 130 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 OR1B1Q8NGR6 318 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 CCDC140Q96MF4 163 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 CITED2Q99967 270 aaPredicted RBP8.01□□□□□ -1.13
COL12A1-206ENST00000474564 C20orf24Q9BUV8 137 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 MAP1LC3BQ9GZQ8 125 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 TMEM231Q9H6L2 316 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 MED9Q9NWA0 146 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 PEMTQ9UBM1 199 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 RABAC1Q9UI14 185 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 HIGD1AQ9Y241 93 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 UFC1Q9Y3C8 167 aa8.01□□□□□ -1.13
COL12A1-206ENST00000474564 HIVEP1P15822 2718 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 A0A1W2PRX2 142 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 RAB19A4D1S5 217 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 PPP5D1E7EU14 171 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 OR2C1O95371 312 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 IGKV1-17P01599 117 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 IL4P05112 153 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 FHITP49789 147 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 PEA15Q15121 130 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 OR11H1Q8NG94 326 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 OR4F17Q8NGA8 305 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 RNF125Q96EQ8 232 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 OR4F4Q96R69 305 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 MRPL32Q9BYC8 188 aaKnown RBP8□□□□□ -1.13
COL12A1-206ENST00000474564 RPRMQ9NS64 109 aa8□□□□□ -1.13
COL12A1-206ENST00000474564 MRPL36Q9P0J6 103 aaKnown RBP8□□□□□ -1.13
COL12A1-206ENST00000474564 PUS1Q9Y606 427 aaKnown RBP eCLIP8□□□□□ -1.13
COL12A1-206ENST00000474564 ZANQ9Y493 2812 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 CSMD1Q96PZ7 3565 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 IGKV1D-37A0A075B6S9 117 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 IGKV1OR2-108A0A075B7D4 117 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 CCL24O00175 119 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 PF4P02776 101 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 MYCNOSP40205 109 aa7.99□□□□□ -1.13
COL12A1-206ENST00000474564 FGF8P55075 233 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms