RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, human

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-204	ENST00000474413	DCANP1	Q8TF63	244 aa		13.27	□□□□□ -0.29
EFNA1-204	ENST00000474413		Q8WTZ3	238 aa		13.27	□□□□□ -0.29
EFNA1-204	ENST00000474413		K7EQG2	157 aa		13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	NKX2-1	P43699	371 aa	Predicted RBP	13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	SPANXN5	Q5MJ07	72 aa		13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	ACOT7L	Q6ZUV0	252 aa		13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	ZNF431	Q8TF32	576 aa	Predicted RBP	13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	RNF125	Q96EQ8	232 aa		13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	SLC35E1	Q96K37	410 aa		13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	LYST	Q99698	3801 aa		13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	OVOL2	Q9BRP0	275 aa		13.26	□□□□□ -0.29
EFNA1-204	ENST00000474413	TRAV2	A0A0B4J234	112 aa		13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	IFNA21	P01568	189 aa		13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	H2AFB2	P0C5Z0	115 aa		13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	BMI1	P35226	326 aa		13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	RAB11A	P62491	216 aa		13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	ZNF846	Q147U1	533 aa		13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	WFDC3	Q8IUB2	231 aa		13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	WDR12	Q9GZL7	423 aa	Known RBP	13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	C11orf1	Q9H5F2	150 aa		13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	PAIP2B	Q9ULR5	123 aa	Known RBP	13.25	□□□□□ -0.29
EFNA1-204	ENST00000474413	ZFP92	A6NM28	416 aa		13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	BUB3	O43684	328 aa		13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	MBP	P02686	304 aa	Predicted RBP	13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	CD5	P06127	495 aa		13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	RPL35A	P18077	110 aa	Known RBP	13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	TMEM14EP	Q6UXP3	125 aa		13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	TRGV9	Q99603	122 aa		13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	TMEM231	Q9H6L2	316 aa		13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	STRAP	Q9Y3F4	350 aa	Known RBP	13.24	□□□□□ -0.29
EFNA1-204	ENST00000474413	DNAH1	Q9P2D7	4330 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	FAM240B	A0A1B0GVZ2	78 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413		A0A1W2PS18	150 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	SCGB1D2	O95969	90 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	ARL16	Q0P5N6	197 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	OR2F1	Q13607	317 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	STXBP6	Q8NFX7	210 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	SMIM8	Q96KF7	97 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	PSENEN	Q9NZ42	101 aa		13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	PLEC	Q15149	4684 aa	Known RBP	13.23	□□□□□ -0.29
EFNA1-204	ENST00000474413	TENM2	Q9NT68	2774 aa		13.22	□□□□□ -0.29
EFNA1-204	ENST00000474413	DEFB131A	P59861	70 aa		13.22	□□□□□ -0.29
EFNA1-204	ENST00000474413	IL15RA	Q13261	267 aa		13.22	□□□□□ -0.29
EFNA1-204	ENST00000474413	DEFB135	Q30KP9	77 aa		13.22	□□□□□ -0.29
EFNA1-204	ENST00000474413	CASC10	Q5T4H9	136 aa		13.22	□□□□□ -0.29
EFNA1-204	ENST00000474413	LEMD1	Q68G75	181 aa		13.22	□□□□□ -0.29
EFNA1-204	ENST00000474413	GSG1L	Q6UXU4	331 aa		13.22	□□□□□ -0.29
EFNA1-204	ENST00000474413	RABAC1	Q9UI14	185 aa		13.22	□□□□□ -0.29
EFNA1-204	ENST00000474413	KIR2DL5B	A0A0G2JN68	375 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	KIR2DL5B	A0A0G2JPC4	375 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	C7orf66	A4D0T2	115 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	C3orf84	H3BNL1	204 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	METTL15P1	P0C7V9	234 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	ZNF688	P0C7X2	276 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	GATA2	P23769	480 aa	Predicted RBP	13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	EIF2B2	P49770	351 aa	Known RBP	13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	RPL11	P62913	178 aa	Known RBP	13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	OR8G2P	Q6IF36	304 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	KIR2DL5A	Q8N109	375 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	KIR2DL5B	Q8NHK3	375 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	PBDC1	Q9BVG4	233 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	BATF3	Q9NR55	127 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	GSKIP	Q9P0R6	139 aa		13.21	□□□□□ -0.29
EFNA1-204	ENST00000474413	DNASE2	O00115	360 aa	Predicted RBP	13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	APOC4	P55056	127 aa		13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	LYZ	P61626	148 aa		13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	PAFAH1B2	P68402	229 aa		13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	RPP30	P78346	268 aa	Known RBP	13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	MZT2B	Q6NZ67	158 aa		13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	NRARP	Q7Z6K4	114 aa		13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	GRAMD2B	Q96HH9	432 aa		13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	C17orf77	Q96MU5	243 aa		13.2	□□□□□ -0.3
EFNA1-204	ENST00000474413	ALMS1	Q8TCU4	4167 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	AGRN	O00468	2067 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413		K7EPK0	472 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	TSC22D2	O75157	780 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	IL5	P05113	134 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	GIG44	P09565	113 aa	Predicted RBP	13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	TAS2R30	P59541	319 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	SIGLEC15	Q6ZMC9	328 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413		Q6ZWC4	215 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	NARS2	Q96I59	477 aa	Known RBP	13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	RAB40C	Q96S21	281 aa		13.19	□□□□□ -0.3
EFNA1-204	ENST00000474413	HELT	A6NFD8	242 aa		13.18	□□□□□ -0.3
EFNA1-204	ENST00000474413	RRAS2	P62070	204 aa	Predicted RBP	13.18	□□□□□ -0.3
EFNA1-204	ENST00000474413	DLK1	P80370	383 aa		13.18	□□□□□ -0.3
EFNA1-204	ENST00000474413	AKR1C1	Q04828	323 aa		13.18	□□□□□ -0.3
EFNA1-204	ENST00000474413	ZFAND6	Q6FIF0	208 aa		13.18	□□□□□ -0.3
EFNA1-204	ENST00000474413	TMEM144	Q7Z5S9	345 aa		13.18	□□□□□ -0.3
EFNA1-204	ENST00000474413	RNF183	Q96D59	192 aa		13.18	□□□□□ -0.3
EFNA1-204	ENST00000474413	TP53TG1	Q9Y2A0	90 aa		13.18	□□□□□ -0.3
EFNA1-204	ENST00000474413	KNCN	A6PVL3	124 aa		13.17	□□□□□ -0.3
EFNA1-204	ENST00000474413	FAM25E	A8MYX2	175 aa		13.17	□□□□□ -0.3
EFNA1-204	ENST00000474413	SOCS3	O14543	225 aa		13.17	□□□□□ -0.3
EFNA1-204	ENST00000474413	TRPT1	Q86TN4	253 aa	Known RBP	13.17	□□□□□ -0.3
EFNA1-204	ENST00000474413	ENKUR	Q8TC29	256 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms