RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 DEFA3P59666 94 aa10.6□□□□□ -0.71
VAMP4-203ENST00000474047 AKR1C1Q04828 323 aa10.6□□□□□ -0.71
VAMP4-203ENST00000474047 FAM90A2PQ658T7 463 aa10.6□□□□□ -0.71
VAMP4-203ENST00000474047 LINC00322Q6ZN03 302 aaPredicted RBP10.6□□□□□ -0.71
VAMP4-203ENST00000474047 LILRB2Q8N423 598 aa10.6□□□□□ -0.71
VAMP4-203ENST00000474047 STXBP6Q8NFX7 210 aa10.6□□□□□ -0.71
VAMP4-203ENST00000474047 SMIM8Q96KF7 97 aa10.6□□□□□ -0.71
VAMP4-203ENST00000474047 RAB40CQ96S21 281 aa10.6□□□□□ -0.71
VAMP4-203ENST00000474047 MS4A6AQ9H2W1 248 aa10.6□□□□□ -0.71
VAMP4-203ENST00000474047 GPN1Q9HCN4 374 aaPredicted RBP10.6□□□□□ -0.71
VAMP4-203ENST00000474047 SMCO3A2RU48 225 aa10.59□□□□□ -0.71
VAMP4-203ENST00000474047 SNRPGP15A8MWD9 76 aa10.59□□□□□ -0.71
VAMP4-203ENST00000474047 L7N2F9 121 aa10.59□□□□□ -0.71
VAMP4-203ENST00000474047 VAMP2P63027 116 aa10.59□□□□□ -0.71
VAMP4-203ENST00000474047 OR8G2PQ6IF36 304 aa10.59□□□□□ -0.71
VAMP4-203ENST00000474047 HELTA6NFD8 242 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 ZNF90Q03938 601 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 OR2F1Q13607 317 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 USF2Q15853 346 aaPredicted RBP10.58□□□□□ -0.72
VAMP4-203ENST00000474047 ODF3L2Q3SX64 289 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 PPP1R14BQ96C90 147 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 RNF125Q96EQ8 232 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 TRGV9Q99603 122 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 FAM110AQ9BQ89 295 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 NUP62P37198 522 aaPredicted RBP10.58□□□□□ -0.72
VAMP4-203ENST00000474047 AP2S1P53680 142 aaPredicted RBP10.58□□□□□ -0.72
VAMP4-203ENST00000474047 APOC4P55056 127 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 LYZP61626 148 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 GSG1LQ6UXU4 331 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 APRG1Q8IVJ8 170 aa10.58□□□□□ -0.72
VAMP4-203ENST00000474047 LSM5Q9Y4Y9 91 aaKnown RBP10.58□□□□□ -0.72
VAMP4-203ENST00000474047 MBPP02686 304 aaPredicted RBP10.57□□□□□ -0.72
VAMP4-203ENST00000474047 IL5P05113 134 aa10.57□□□□□ -0.72
VAMP4-203ENST00000474047 RPL35AP18077 110 aaKnown RBP10.57□□□□□ -0.72
VAMP4-203ENST00000474047 C2orf50Q96LR7 162 aa10.57□□□□□ -0.72
VAMP4-203ENST00000474047 CITED4Q96RK1 184 aa10.57□□□□□ -0.72
VAMP4-203ENST00000474047 RETNQ9HD89 108 aa10.57□□□□□ -0.72
VAMP4-203ENST00000474047 IGKV1D-37A0A075B6S9 117 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 TRAV2A0A0B4J234 112 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 METTL15P1P0C7V9 234 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 BCAP31P51572 246 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 TAS2R30P59541 319 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 IFITM3Q01628 133 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 C16orf54Q6UWD8 224 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 ACOT7LQ6ZUV0 252 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 THAP8Q8NA92 274 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 OR10P1Q8NGE3 313 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 MAP6D1Q9H9H5 199 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 MGAT4CQ9UBM8 478 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 RCL1Q9Y2P8 373 aaKnown RBP10.56□□□□□ -0.72
VAMP4-203ENST00000474047 U3KQE9 123 aa10.56□□□□□ -0.72
VAMP4-203ENST00000474047 PRSS46E5RG02 174 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 TSC22D2O75157 780 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 CFDP00746 253 aaPredicted RBP10.55□□□□□ -0.72
VAMP4-203ENST00000474047 PVALBP20472 110 aaPredicted RBP10.55□□□□□ -0.72
VAMP4-203ENST00000474047 DEFB131AP59861 70 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 RRAS2P62070 204 aaPredicted RBP10.55□□□□□ -0.72
VAMP4-203ENST00000474047 NRARPQ7Z6K4 114 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 STPG3Q8N7X2 389 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 INMT-MINDY4F8WBC2 141 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 PAX9P55771 341 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 S100A10P60903 97 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 SIGLEC15Q6ZMC9 328 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 BPIFCQ8NFQ6 507 aa10.55□□□□□ -0.72
VAMP4-203ENST00000474047 C7orf66A4D0T2 115 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 UBE2CO00762 179 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 BUB3O43684 328 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 PRAF2O60831 178 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 S100A7P31151 101 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 CAV2P51636 162 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 DLK1P80370 383 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 ZNF124Q15973 351 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 LEMD1Q68G75 181 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 TMEM14EPQ6UXP3 125 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 TMEM144Q7Z5S9 345 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 GLMPQ8WWB7 406 aa10.54□□□□□ -0.72
VAMP4-203ENST00000474047 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 K7EPK0 472 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 K7EQG2 157 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 NPVFQ9HCQ7 196 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 FBXL17Q9UF56 701 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 KIR2DL5BA0A0G2JN68 375 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 KIR2DL5BA0A0G2JPC4 375 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 CCNKO75909 580 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 ORM2P19652 201 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 KIR2DL5AQ8N109 375 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 FAM24BQ8N5W8 94 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 KIR2DL5BQ8NHK3 375 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 NRN1Q9NPD7 142 aa10.53□□□□□ -0.72
VAMP4-203ENST00000474047 PMS2P5A8MQ11 134 aa10.52□□□□□ -0.73
VAMP4-203ENST00000474047 GOSR2O14653 212 aa10.52□□□□□ -0.73
VAMP4-203ENST00000474047 GATA2P23769 480 aaPredicted RBP10.52□□□□□ -0.73
VAMP4-203ENST00000474047 SNRPD3P62318 126 aaKnown RBP10.52□□□□□ -0.73
VAMP4-203ENST00000474047 C1orf194Q5T5A4 169 aa10.52□□□□□ -0.73
VAMP4-203ENST00000474047 CYP2G1PQ6ZSU1 146 aa10.52□□□□□ -0.73
VAMP4-203ENST00000474047 STHQ8IWL8 128 aa10.52□□□□□ -0.73
VAMP4-203ENST00000474047 OR8I2Q8N0Y5 310 aa10.52□□□□□ -0.73
VAMP4-203ENST00000474047 OR1B1Q8NGR6 318 aa10.52□□□□□ -0.73
VAMP4-203ENST00000474047 MUC7Q8TAX7 377 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms