RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 FCN2Q15485 313 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 TMEM144Q7Z5S9 345 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 TMEM61Q8N0U2 210 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 TMEM252Q8N6L7 170 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 TMEM217Q8N7C4 229 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 THAP8Q8NA92 274 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 WDR89Q96FK6 387 aaPredicted RBP9.37□□□□□ -0.91
DDX56-209ENST00000473924 PBDC1Q9BVG4 233 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 TMEM231Q9H6L2 316 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 NPVFQ9HCQ7 196 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 OR5AC2Q9NZP5 309 aa9.37□□□□□ -0.91
DDX56-209ENST00000473924 IGKV1OR2-108A0A075B7D4 117 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 TRAV25A0A0B4J276 109 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 IGHV3-66A0A0C4DH42 116 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 IGSF23A1L1A6 192 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 FNDC10F2Z333 226 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 CHEK1O14757 476 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 HNRNPCP07910 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
DDX56-209ENST00000473924 P2RY1P47900 373 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 LYZP61626 148 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 HBG1P69891 147 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 HBG2P69892 147 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 OR2F1Q13607 317 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 RNF125Q96EQ8 232 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 GGACTQ9BVM4 153 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 SLC25A31Q9H0C2 315 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 RABAC1Q9UI14 185 aa9.36□□□□□ -0.91
DDX56-209ENST00000473924 SORL1Q92673 2214 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 ZNF785A8K8V0 405 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 H0YIZ8 118 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 MPC2O95563 127 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 CFDP00746 253 aaPredicted RBP9.35□□□□□ -0.91
DDX56-209ENST00000473924 APOHP02749 345 aaPredicted RBP9.35□□□□□ -0.91
DDX56-209ENST00000473924 CRYBB3P26998 211 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 S100A11P31949 105 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 CD81P60033 236 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 RPL11P62913 178 aaKnown RBP9.35□□□□□ -0.91
DDX56-209ENST00000473924 USF2Q15853 346 aaPredicted RBP9.35□□□□□ -0.91
DDX56-209ENST00000473924 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 BPIFCQ8NFQ6 507 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 OR11H7Q8NGC8 314 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 ST8SIA2Q92186 375 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 GRAMD2BQ96HH9 432 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 RNF2Q99496 336 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 PFDN2Q9UHV9 154 aa9.35□□□□□ -0.91
DDX56-209ENST00000473924 IGKV3-7A0A075B6H7 116 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 TSPAN4O14817 238 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 CD5P06127 495 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 CYP2G1PQ6ZSU1 146 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 TCF24Q7RTU0 167 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 THAP6Q8TBB0 222 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 PPP1R14BQ96C90 147 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 SPAG8Q99932 426 aaPredicted RBP9.34□□□□□ -0.91
DDX56-209ENST00000473924 VSIRQ9H7M9 311 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 UQCC1Q9NVA1 299 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 SMAD5-AS1Q9Y6J3 95 aa9.34□□□□□ -0.91
DDX56-209ENST00000473924 DFFBO76075 338 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 GATA2P23769 480 aaPredicted RBP9.33□□□□□ -0.92
DDX56-209ENST00000473924 NUP62P37198 522 aaPredicted RBP9.33□□□□□ -0.92
DDX56-209ENST00000473924 EIF2B2P49770 351 aaKnown RBP9.33□□□□□ -0.92
DDX56-209ENST00000473924 SELENOTP62341 195 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 PAFAH1B2P68402 229 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 EWSR1Q01844 656 aaKnown RBP eCLIP9.33□□□□□ -0.92
DDX56-209ENST00000473924 NHLH2Q02577 135 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 RAB31Q13636 194 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 ATP6V1FQ16864 119 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 NEURL2Q9BR09 285 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 RNF126Q9BV68 326 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 TMEM147Q9BVK8 224 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 MBD2Q9UBB5 411 aa9.33□□□□□ -0.92
DDX56-209ENST00000473924 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
DDX56-209ENST00000473924 UBE2L5PA0A1B0GUS4 154 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 OR4C46A6NHA9 309 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 CD7P09564 240 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 GIPP09681 153 aaPredicted RBP9.32□□□□□ -0.92
DDX56-209ENST00000473924 ORM2P19652 201 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 TFPI2P48307 235 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 BAXQ07812 192 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 FGL1Q08830 312 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 ZNF546Q86UE3 836 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 Q8N1Y9 231 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 GBGT1Q8N5D6 347 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 OR5C1Q8NGR4 320 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 OR1B1Q8NGR6 318 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 ASB13Q8WXK3 278 aa9.32□□□□□ -0.92
DDX56-209ENST00000473924 HELTA6NFD8 242 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 DNASE2O00115 360 aaPredicted RBP9.31□□□□□ -0.92
DDX56-209ENST00000473924 AGPAT2O15120 278 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 LINC00869P0C866 280 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 RPL12P30050 165 aaKnown RBP9.31□□□□□ -0.92
DDX56-209ENST00000473924 S100A7P31151 101 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 CAMLGP49069 296 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 RAP2BP61225 183 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 FAM90A2PQ658T7 463 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 C16orf54Q6UWD8 224 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 TMEM182Q6ZP80 229 aaPredicted RBP9.31□□□□□ -0.92
DDX56-209ENST00000473924 WFDC3Q8IUB2 231 aa9.31□□□□□ -0.92
DDX56-209ENST00000473924 DOK5Q9P104 306 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms