RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 MFAP2P55001 183 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 Q6ZVH6 145 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 ZNF329Q86UD4 541 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 OR4C13Q8NGP0 309 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 TMEM167AQ8TBQ9 72 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 FXYD5Q96DB9 178 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 TXN2Q99757 166 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 RNF24Q9Y225 148 aa8.8□□□□□ -1
C9orf3-214ENST00000473778 INS-IGF2F8WCM5 200 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 SLC25A17O43808 307 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 MOSP00540 346 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 USF1P22415 310 aaPredicted RBP8.79□□□□□ -1
C9orf3-214ENST00000473778 ERHP84090 104 aaKnown RBP8.79□□□□□ -1
C9orf3-214ENST00000473778 MEF2CQ06413 473 aaPredicted RBP8.79□□□□□ -1
C9orf3-214ENST00000473778 C16orf54Q6UWD8 224 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 UNQ5815/PRO19632Q6UWF5 114 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 TMEM108Q6UXF1 575 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 Q6ZN92 141 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 FAM19A2Q8N3H0 131 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 OR10X1Q8NGY0 326 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 MBD6Q96DN6 1003 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 MRPL32Q9BYC8 188 aaKnown RBP8.79□□□□□ -1
C9orf3-214ENST00000473778 SAP30LQ9HAJ7 183 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 SH3BGRL2Q9UJC5 107 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 AMMECR1Q9Y4X0 333 aaPredicted RBP8.79□□□□□ -1
C9orf3-214ENST00000473778 TPRP12270 2363 aaKnown RBP8.79□□□□□ -1
C9orf3-214ENST00000473778 CORTO00230 105 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 TNFRSF1AP19438 455 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 CNTFRP26992 372 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 LOXP28300 417 aaPredicted RBP8.79□□□□□ -1
C9orf3-214ENST00000473778 DLX6P56179 175 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 ATP5IP56385 69 aaPredicted RBP8.79□□□□□ -1
C9orf3-214ENST00000473778 KRTDAPP60985 99 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 TMEM30BQ3MIR4 351 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 SPATA45Q537H7 98 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 C10orf113Q5VZT2 155 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 PAXXQ9BUH6 204 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 C7orf69Q9H7B7 122 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 NRN1Q9NPD7 142 aa8.79□□□□□ -1
C9orf3-214ENST00000473778 PPIAL4EA0A075B759 164 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 TCRBV4S1A1TA0A5B7 111 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 PPIAL4DF5H284 164 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 COX7A2P2O60397 106 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 ZNF253O75346 499 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 AMY1AP04745 511 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 PPIAL4FP0DN26 164 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 PMCHP20382 165 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 MYCNOSP40205 109 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 AMTP48728 403 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 HCP5Q6MZN7 132 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 Q71RC1 249 aaPredicted RBP8.78□□□□□ -1
C9orf3-214ENST00000473778 NIT1Q86X76 327 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 IGHV3-21A0A0B4J1V1 117 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 MT-ND6P03923 174 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 PRR27Q6MZM9 219 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 LINC00322Q6ZN03 302 aaPredicted RBP8.78□□□□□ -1
C9orf3-214ENST00000473778 LINC00305Q7Z4B0 112 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 SIGLECL1Q8N7X8 197 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 NUP35Q8NFH5 326 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 KCNS1Q96KK3 526 aa8.78□□□□□ -1
C9orf3-214ENST00000473778 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 IZUMO1RA6ND01 250 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 C16orf97H3BN30 126 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 PEX7O00628 323 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 CTRLP40313 264 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 OCIAD2Q56VL3 154 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 OR10J3Q5JRS4 329 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 LDLRAD2Q5SZI1 272 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 WDR73Q6P4I2 378 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 PDPNQ86YL7 162 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 SPACA3Q8IXA5 215 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 THAP8Q8NA92 274 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 ZNF596Q8TC21 504 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 C18orf32Q8TCD1 76 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 RNF2Q99496 336 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 TRAV30A0A087WSZ9 112 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 H3BTX0 84 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 KLK10O43240 276 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
C9orf3-214ENST00000473778 PRSS33Q8NF86 280 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 TSKUQ8WUA8 353 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 BLNKQ8WV28 456 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
C9orf3-214ENST00000473778 CST9LQ9H4G1 147 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 WASHC3Q9Y3C0 194 aa8.77□□□□□ -1.01
C9orf3-214ENST00000473778 DIRC3C9JPN6 131 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 HYPMO75409 117 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 ZNF324O75467 553 aaPredicted RBP8.76□□□□□ -1.01
C9orf3-214ENST00000473778 HLA-DQA1P01909 254 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 IGLC2P0DOY2 106 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 IGLC3P0DOY3 106 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 ORM2P19652 201 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 GPR6P46095 362 aaPredicted RBP8.76□□□□□ -1.01
C9orf3-214ENST00000473778 MUC6Q6W4X9 2439 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 TMEM186Q96B77 213 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 APCSP02743 223 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 ZNF137PP52743 207 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 TMEM155Q4W5P6 130 aa8.76□□□□□ -1.01
C9orf3-214ENST00000473778 LINC00311Q8N616 119 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms