RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 KNCNA6PVL3 124 aa9.77□□□□□ -0.85
CHD3-209ENST00000473376 RGS5O15539 181 aa9.77□□□□□ -0.85
CHD3-209ENST00000473376 FABP1P07148 127 aa9.77□□□□□ -0.85
CHD3-209ENST00000473376 SIGLEC15Q6ZMC9 328 aa9.77□□□□□ -0.85
CHD3-209ENST00000473376 ZNF705AQ6ZN79 300 aaPredicted RBP9.77□□□□□ -0.85
CHD3-209ENST00000473376 TMEM170AQ8WVE7 144 aa9.77□□□□□ -0.85
CHD3-209ENST00000473376 NPIPB3Q92617 1050 aa9.77□□□□□ -0.85
CHD3-209ENST00000473376 FAM210BQ96KR6 192 aa9.77□□□□□ -0.85
CHD3-209ENST00000473376 NAA50Q9GZZ1 169 aaKnown RBP9.77□□□□□ -0.85
CHD3-209ENST00000473376 IGHV4-4A0A075B6R2 117 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 TEX48A0A1B0GUV7 120 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 DUXBA0A1W2PPF3 345 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 ANKRD20A5PA0PJZ0 165 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 SMIM18P0DKX4 95 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 P0DMU3 169 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 FAM231AP0DMU4 169 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 FAM231CP0DMU5 169 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 PSG1P11464 419 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 HLA-DRB4P13762 266 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 KLF9Q13886 244 aaPredicted RBP9.76□□□□□ -0.85
CHD3-209ENST00000473376 SMCO1Q147U7 214 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 Q6ZTC4 211 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 OR4C16Q8NGL9 310 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 RSL24D1Q9UHA3 163 aaKnown RBP9.76□□□□□ -0.85
CHD3-209ENST00000473376 HLA-DRB4X5D2U9 266 aa9.76□□□□□ -0.85
CHD3-209ENST00000473376 ZNF705FA8MVS1 300 aaPredicted RBP9.75□□□□□ -0.85
CHD3-209ENST00000473376 CTDSP2O14595 271 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 NXPH3O95157 252 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 CFDP00746 253 aaPredicted RBP9.75□□□□□ -0.85
CHD3-209ENST00000473376 IFNA10P01566 189 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 ZNF705DP0CH99 300 aaPredicted RBP9.75□□□□□ -0.85
CHD3-209ENST00000473376 ZNF705BP0CI00 300 aaPredicted RBP9.75□□□□□ -0.85
CHD3-209ENST00000473376 ANXA3P12429 323 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 ALDH3B2P48448 385 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 C12orf74Q32Q52 190 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 GPR141Q7Z602 305 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 CLVS1Q8IUQ0 354 aaPredicted RBP9.75□□□□□ -0.85
CHD3-209ENST00000473376 LGI3Q8N145 548 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 OR51S1Q8NGJ8 323 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 DTD1Q8TEA8 209 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 RAB2BQ8WUD1 216 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 DEDD2Q8WXF8 326 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 RNF125Q96EQ8 232 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 DIRAS2Q96HU8 199 aa9.75□□□□□ -0.85
CHD3-209ENST00000473376 MRPS26Q9BYN8 205 aaKnown RBP9.75□□□□□ -0.85
CHD3-209ENST00000473376 CCDC59Q9P031 241 aaKnown RBP9.75□□□□□ -0.85
CHD3-209ENST00000473376 DEFB131BA0A096LNP1 70 aa9.74□□□□□ -0.85
CHD3-209ENST00000473376 SLC25A6P12236 298 aa9.74□□□□□ -0.85
CHD3-209ENST00000473376 ID1P41134 155 aa9.74□□□□□ -0.85
CHD3-209ENST00000473376 PSMB3P49720 205 aa9.74□□□□□ -0.85
CHD3-209ENST00000473376 TMBIM6P55061 237 aa9.74□□□□□ -0.85
CHD3-209ENST00000473376 SUPT4H1P63272 117 aaKnown RBP9.74□□□□□ -0.85
CHD3-209ENST00000473376 NDUFAF3Q9BU61 184 aa9.74□□□□□ -0.85
CHD3-209ENST00000473376 SNRPGP15A8MWD9 76 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 SPART-AS1P0CW21 52 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 AKR1C4P17516 323 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 IL18Q14116 193 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 OXA1LQ15070 435 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 FAAP20Q6NZ36 180 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 FOXI2Q6ZQN5 318 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 POM121L12Q8N7R1 296 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 ACY3Q96HD9 319 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 SOSTQ9BQB4 213 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 SAV1Q9H4B6 383 aaPredicted RBP9.73□□□□□ -0.85
CHD3-209ENST00000473376 CLEC5AQ9NY25 188 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 SLC45A2Q9UMX9 530 aa9.73□□□□□ -0.85
CHD3-209ENST00000473376 AGRNO00468 2067 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 ISLRO14498 428 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 PITX3O75364 302 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 S100A7P31151 101 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 MEOX2P50222 304 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 PAX9P55771 341 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 GAMTQ14353 236 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 DYNC2LI1Q8TCX1 351 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 TRGV9Q99603 122 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 XCL2Q9UBD3 114 aa9.72□□□□□ -0.85
CHD3-209ENST00000473376 IGKV1D-37A0A075B6S9 117 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 ZFP92A6NM28 416 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 SOCS3O14543 225 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 FAUP35544 74 aaKnown RBP9.71□□□□□ -0.86
CHD3-209ENST00000473376 RAB11AP62491 216 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 RPP30P78346 268 aaKnown RBP9.71□□□□□ -0.86
CHD3-209ENST00000473376 SPCS2Q15005 226 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 ZNF79Q15937 498 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 LGALS9BQ3B8N2 356 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 LYZL2Q7Z4W2 148 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 OR4D5Q8NGN0 318 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 SLC35E1Q96K37 410 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 CIB3Q96Q77 187 aaPredicted RBP9.71□□□□□ -0.86
CHD3-209ENST00000473376 RBKSQ9H477 322 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 CELA1Q9UNI1 258 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 RFNGQ9Y644 331 aa9.71□□□□□ -0.86
CHD3-209ENST00000473376 A8MTW9 85 aa9.7□□□□□ -0.86
CHD3-209ENST00000473376 MED6O75586 246 aa9.7□□□□□ -0.86
CHD3-209ENST00000473376 AP3S2P59780 193 aa9.7□□□□□ -0.86
CHD3-209ENST00000473376 GGNBP1Q5YKI7 109 aa9.7□□□□□ -0.86
CHD3-209ENST00000473376 THAP8Q8NA92 274 aa9.7□□□□□ -0.86
CHD3-209ENST00000473376 HECTD4Q9Y4D8 3996 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms