RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 H3BP45 60 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 GOSR2O14653 212 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 OVOL1O14753 267 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 TGOLN2O43493 480 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 SSNA1O43805 119 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 GGCTO75223 188 aaKnown RBP5.1□□□□□ -1.59
SCN9A-206ENST00000472119 MED6O75586 246 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 MBPP02686 304 aaPredicted RBP5.1□□□□□ -1.59
SCN9A-206ENST00000472119 IFNA4P05014 189 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 ZP3P21754 424 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 OPRK1P41145 380 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 MFAP4P55083 255 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 KLF5Q13887 457 aaPredicted RBP5.1□□□□□ -1.59
SCN9A-206ENST00000472119 TATDN3Q17R31 274 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 SPANXN5Q5MJ07 72 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 ACSM6Q6P461 480 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 C2orf50Q96LR7 162 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 CHRDL1Q9BU40 450 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 MRPL36Q9P0J6 103 aaKnown RBP5.1□□□□□ -1.59
SCN9A-206ENST00000472119 ALG5Q9Y673 324 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 NBEAL1Q6ZS30 2694 aa5.1□□□□□ -1.59
SCN9A-206ENST00000472119 IGHV3OR16-8A0A075B7F1 116 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 ZNF320A2RRD8 509 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 C7orf66A4D0T2 115 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 C15orf62A8K5M9 175 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 CORTO00230 105 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 SAP30O75446 220 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 TMEM50AO95807 157 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 CTSGP08311 255 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 PAX9P55771 341 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 FAM209BQ5JX69 171 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 PRSS54Q6PEW0 395 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 NOXA1Q86UR1 476 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 GPHB5Q86YW7 130 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 RNASEH2CQ8TDP1 164 aaKnown RBP5.09□□□□□ -1.59
SCN9A-206ENST00000472119 BSCL2Q96G97 398 aaPredicted RBP5.09□□□□□ -1.59
SCN9A-206ENST00000472119 SMIM8Q96KF7 97 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 CIB3Q96Q77 187 aaPredicted RBP5.09□□□□□ -1.59
SCN9A-206ENST00000472119 OR4C12Q96R67 309 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 MCRIP2Q9BUT9 160 aaKnown RBP5.09□□□□□ -1.59
SCN9A-206ENST00000472119 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 PSENENQ9NZ42 101 aa5.09□□□□□ -1.59
SCN9A-206ENST00000472119 RCL1Q9Y2P8 373 aaKnown RBP5.09□□□□□ -1.59
SCN9A-206ENST00000472119 LSM5Q9Y4Y9 91 aaKnown RBP5.09□□□□□ -1.59
SCN9A-206ENST00000472119 NOTCH1P46531 2555 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 RPS10-NUDT3A0A1W2PQS6 291 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 K7EPK0 472 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 L7N2F9 121 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 NUPL2O15504 423 aaKnown RBP5.08□□□□□ -1.6
SCN9A-206ENST00000472119 GNG7O60262 68 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 CCNKO75909 580 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 PRB2P02812 416 aaPredicted RBP5.08□□□□□ -1.6
SCN9A-206ENST00000472119 CSN3P07498 182 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 EDN2P20800 178 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 NPBWR1P48145 328 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 RND2P52198 227 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 ATP5IP56385 69 aaPredicted RBP5.08□□□□□ -1.6
SCN9A-206ENST00000472119 H2BFSP57053 126 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 S100A10P60903 97 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 RAB11AP62491 216 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 VAMP2P63027 116 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 RPP30P78346 268 aaKnown RBP5.08□□□□□ -1.6
SCN9A-206ENST00000472119 IL15RAQ13261 267 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 RAB32Q13637 225 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 OXA1LQ15070 435 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 FAM106AQ4KMX7 169 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 C9orf66Q5T8R8 295 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 SPSB3Q6PJ21 355 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 UNQ9165/PRO28630Q6UXU0 137 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 IL34Q6ZMJ4 242 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 HAPLN4Q86UW8 402 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 OR9G4Q8NGQ1 327 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 OR4X1Q8NH49 305 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 NPIPB3Q92617 1050 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 ACY3Q96HD9 319 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 RAB40CQ96S21 281 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 TXN2Q99757 166 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 ELOVL1Q9BW60 279 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 MGAT4CQ9UBM8 478 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 STRAPQ9Y3F4 350 aaKnown RBP5.08□□□□□ -1.6
SCN9A-206ENST00000472119 SELENOKQ9Y6D0 94 aa5.08□□□□□ -1.6
SCN9A-206ENST00000472119 LGALS9O00182 355 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 ZNF207O43670 478 aaKnown RBP5.07□□□□□ -1.6
SCN9A-206ENST00000472119 CLN5O75503 358 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 YIF1AO95070 293 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 METTL15P1P0C7V9 234 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 SLC25A4P12235 298 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 CXCL3P19876 107 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 FCGR2BP31994 310 aaPredicted RBP5.07□□□□□ -1.6
SCN9A-206ENST00000472119 GPX4P36969 197 aaPredicted RBP5.07□□□□□ -1.6
SCN9A-206ENST00000472119 BCAP31P51572 246 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 GAMTQ14353 236 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 FCN2Q15485 313 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 TIGITQ495A1 244 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 LRRC37A5PQ49AS3 106 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 OR8G2PQ6IF36 304 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 ETFRF1Q6IPR1 90 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 ADAMTSL5Q6ZMM2 481 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 SLC16A13Q7RTY0 426 aa5.07□□□□□ -1.6
SCN9A-206ENST00000472119 CACNG8Q8WXS5 425 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms