RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ZNF705AQ6ZN79 300 aaPredicted RBP2.11□□□□□ -2.07
CD46-213ENST00000471987 CLEC20AQ6ZU45 233 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 SSX8Q7RTT4 187 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 ATP5L2Q7Z4Y8 100 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 MSRB3Q8IXL7 192 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 KCNRGQ8N5I3 272 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 ZDHHC22Q8N966 263 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 Q8N976 141 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 ZFP62Q8NB50 900 aaPredicted RBP2.11□□□□□ -2.07
CD46-213ENST00000471987 C11orf72Q8NBR9 251 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 OR10J6PQ8NGY7 276 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 OR2T27Q8NH04 317 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 OR10AC1Q8NH08 325 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 SLC25A40Q8TBP6 338 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 RAB2BQ8WUD1 216 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 PSMF1Q92530 271 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 SLC25A46Q96AG3 418 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 GNPNAT1Q96EK6 184 aaPredicted RBP2.11□□□□□ -2.07
CD46-213ENST00000471987 CIB3Q96Q77 187 aaPredicted RBP2.11□□□□□ -2.07
CD46-213ENST00000471987 LINC01587Q99440 93 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 VAMP8Q9BV40 100 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 DEFB127Q9H1M4 99 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 DUSP21Q9H596 190 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 FKBP11Q9NYL4 201 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 XCL2Q9UBD3 114 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 MRPS16Q9Y3D3 137 aaKnown RBP2.11□□□□□ -2.07
CD46-213ENST00000471987 KIF1AQ12756 1690 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 BAHCC1Q9P281 2608 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 SPHKAPQ2M3C7 1700 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 TRPM3Q9HCF6 1732 aaPredicted RBP2.11□□□□□ -2.07
CD46-213ENST00000471987 MYH8P13535 1937 aa2.11□□□□□ -2.07
CD46-213ENST00000471987 KMT2BQ9UMN6 2715 aaPredicted RBP2.11□□□□□ -2.07
CD46-213ENST00000471987 DIP2AQ14689 1571 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 RBBP6Q7Z6E9 1792 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 CITO14578 2027 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 SCN4AP35499 1836 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 SBF2Q86WG5 1849 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 TARBP1Q13395 1621 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 SHROOM2Q13796 1616 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 VCANP13611 3396 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 A0A087WXM4 84 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 A0A087X0T9 212 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 RBMY1BA6NDE4 496 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 RBMY1EA6NEQ0 496 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 TLCD2A6NGC4 264 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 C12orf77C9JDV5 145 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 GSTZ1O43708 216 aaPredicted RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 DEDDO75618 318 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 TRGC2P03986 189 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 NMBP08949 121 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 RBMY1DP0C7P1 496 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 RBMY1A1P0DJD3 496 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 IFITM1P13164 125 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 CRYBB3P26998 211 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 KLK7P49862 253 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 AQP4P55087 323 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 FOXA1P55317 472 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 GFERP55789 205 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 ARPP19P56211 112 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 ERCC8Q13216 396 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 HES1Q14469 280 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 TMEM183BQ1AE95 376 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 FBXL19-AS1Q494R0 122 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 KHDC3LQ587J8 217 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 TMEM236Q5W0B7 351 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 LCN12Q6JVE5 192 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 MRPL54Q6P161 138 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 ZNF880Q6PDB4 577 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 MORN3Q6PF18 240 aaPredicted RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 TEX43Q6ZNM6 134 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 Q6ZR03 302 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 Q6ZS49 121 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 RPS19BP1Q86WX3 136 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 ZIC4Q8N9L1 334 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 BPIFB6Q8NFQ5 453 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 ZNF431Q8TF32 576 aaPredicted RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 LRRC29Q8WV35 223 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 ERMAPQ96PL5 475 aaPredicted RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 SPACA5Q96QH8 159 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 OR2A5Q96R48 311 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 GPX7Q96SL4 187 aaPredicted RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 NAA38Q9BRA0 125 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 TM2D3Q9BRN9 247 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 SEC11CQ9BY50 192 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 AICDAQ9GZX7 198 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 ATG5Q9H1Y0 275 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 CRCT1Q9UGL9 99 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 LINC00527Q9UJ94 153 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 PCTPQ9UKL6 214 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 HEBP2Q9Y5Z4 205 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 COL24A1Q17RW2 1714 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 SYCP2Q9BX26 1530 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 DUOX2Q9NRD8 1548 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 SCN11AQ9UI33 1791 aa2.1□□□□□ -2.07
CD46-213ENST00000471987 PHF3Q92576 2039 aaKnown RBP2.1□□□□□ -2.07
CD46-213ENST00000471987 ABCA6Q8N139 1617 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 ANK1P16157 1881 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 GPR179Q6PRD1 2367 aa2.09□□□□□ -2.07
CD46-213ENST00000471987 PIK3C2AO00443 1686 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms