RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	DEFB135	Q30KP9	77 aa		10.99	□□□□□ -0.65
SSR4-208	ENST00000471880	FAM90A2P	Q658T7	463 aa		10.99	□□□□□ -0.65
SSR4-208	ENST00000471880	LEMD1	Q68G75	181 aa		10.99	□□□□□ -0.65
SSR4-208	ENST00000471880	S100Z	Q8WXG8	99 aa		10.99	□□□□□ -0.65
SSR4-208	ENST00000471880	CCDC32	Q9BV29	185 aa		10.99	□□□□□ -0.65
SSR4-208	ENST00000471880	NUDT15	Q9NV35	164 aa		10.99	□□□□□ -0.65
SSR4-208	ENST00000471880	STRAP	Q9Y3F4	350 aa	Known RBP	10.99	□□□□□ -0.65
SSR4-208	ENST00000471880	TCRB	P04435	133 aa		10.98	□□□□□ -0.65
SSR4-208	ENST00000471880	ZNF90	Q03938	601 aa		10.98	□□□□□ -0.65
SSR4-208	ENST00000471880	AKR1C1	Q04828	323 aa		10.98	□□□□□ -0.65
SSR4-208	ENST00000471880	ZNF846	Q147U1	533 aa		10.98	□□□□□ -0.65
SSR4-208	ENST00000471880	IAH1	Q2TAA2	248 aa	Predicted RBP	10.98	□□□□□ -0.65
SSR4-208	ENST00000471880	EDA2R	Q9HAV5	297 aa		10.98	□□□□□ -0.65
SSR4-208	ENST00000471880	PSENEN	Q9NZ42	101 aa		10.98	□□□□□ -0.65
SSR4-208	ENST00000471880	FAM240B	A0A1B0GVZ2	78 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	HELT	A6NFD8	242 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	CCS	O14618	274 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	ZNF688	P0C7X2	276 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	OR8G2P	Q6IF36	304 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	MZT2B	Q6NZ67	158 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	FAM24B	Q8N5W8	94 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	RNF125	Q96EQ8	232 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	PFDN2	Q9UHV9	154 aa		10.97	□□□□□ -0.65
SSR4-208	ENST00000471880	SPRY2	O43597	315 aa		10.96	□□□□□ -0.65
SSR4-208	ENST00000471880	H2AFB2	P0C5Z0	115 aa		10.96	□□□□□ -0.65
SSR4-208	ENST00000471880	CASC10	Q5T4H9	136 aa		10.96	□□□□□ -0.65
SSR4-208	ENST00000471880	STH	Q8IWL8	128 aa		10.96	□□□□□ -0.65
SSR4-208	ENST00000471880	SEC22C	Q9BRL7	303 aa		10.96	□□□□□ -0.65
SSR4-208	ENST00000471880	DNAH7	Q8WXX0	4024 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	C5orf51	A6NDU8	294 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	SNRPGP15	A8MWD9	76 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	UBE2C	O00762	179 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	AP2S1	P53680	142 aa	Predicted RBP	10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	RRAS2	P62070	204 aa	Predicted RBP	10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	C16orf54	Q6UWD8	224 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	SIGLEC15	Q6ZMC9	328 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	ACOT7L	Q6ZUV0	252 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	OR4D5	Q8NGN0	318 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	ENKUR	Q8TC29	256 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	MITD1	Q8WV92	249 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	OVOL2	Q9BRP0	275 aa		10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	WDR12	Q9GZL7	423 aa	Known RBP	10.95	□□□□□ -0.66
SSR4-208	ENST00000471880	IGKV1D-37	A0A075B6S9	117 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	KIR2DL5B	A0A0G2JN68	375 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	KIR2DL5B	A0A0G2JPC4	375 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880		A6NHS1	94 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880		K7EQG2	157 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880		L7N2F9	121 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	NUP62	P37198	522 aa	Predicted RBP	10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	VAMP2	P63027	116 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	ID3	Q02535	119 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	PSMG4	Q5JS54	123 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880		Q6ZWC4	215 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	KIR2DL5A	Q8N109	375 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	KIR2DL5B	Q8NHK3	375 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	GLMP	Q8WWB7	406 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	CSTL1	Q9H114	145 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	PTTG2	Q9NZH5	202 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	LSM5	Q9Y4Y9	91 aa	Known RBP	10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	TENM2	Q9NT68	2774 aa		10.94	□□□□□ -0.66
SSR4-208	ENST00000471880	TRAV2	A0A0B4J234	112 aa		10.93	□□□□□ -0.66
SSR4-208	ENST00000471880	KNCN	A6PVL3	124 aa		10.93	□□□□□ -0.66
SSR4-208	ENST00000471880	CA1	P00915	261 aa	Predicted RBP	10.93	□□□□□ -0.66
SSR4-208	ENST00000471880	METTL15P1	P0C7V9	234 aa		10.93	□□□□□ -0.66
SSR4-208	ENST00000471880	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.93	□□□□□ -0.66
SSR4-208	ENST00000471880	ZNF431	Q8TF32	576 aa	Predicted RBP	10.93	□□□□□ -0.66
SSR4-208	ENST00000471880	TRGV9	Q99603	122 aa		10.93	□□□□□ -0.66
SSR4-208	ENST00000471880		U3KQE9	123 aa		10.93	□□□□□ -0.66
SSR4-208	ENST00000471880	STARD9	Q9P2P6	4700 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	BUB3	O43684	328 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	ORM2	P19652	201 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	GATA2	P23769	480 aa	Predicted RBP	10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	BCAP31	P51572	246 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	ACTL10	Q5JWF8	245 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	LINC00299	Q6ZSB3	139 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	BPIFC	Q8NFQ6	507 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	IL17D	Q8TAD2	202 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	SMIM8	Q96KF7	97 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	RAB40C	Q96S21	281 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	SLC25A22	Q9H936	323 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	MGAT4C	Q9UBM8	478 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	TBC1D24	Q9ULP9	559 aa		10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	RCL1	Q9Y2P8	373 aa	Known RBP	10.92	□□□□□ -0.66
SSR4-208	ENST00000471880	AGRN	O00468	2067 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	IGKV1OR2-108	A0A075B7D4	117 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880		A0A0J9YWU9	116 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	CCNK	O75909	580 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	S100A10	P60903	97 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	SNRPD3	P62318	126 aa	Known RBP	10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	PMS2P11	Q13670	270 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	OR8I2	Q8N0Y5	310 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	THAP8	Q8NA92	274 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	OR1B1	Q8NGR6	318 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	DCANP1	Q8TF63	244 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	NRN1	Q9NPD7	142 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	DOK5	Q9P104	306 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	TP53TG1	Q9Y2A0	90 aa		10.91	□□□□□ -0.66
SSR4-208	ENST00000471880	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.9	□□□□□ -0.66
SSR4-208	ENST00000471880	CSMD3	Q7Z407	3707 aa		10.9	□□□□□ -0.66

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