RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	IGF2BP2-AS1	Q96M15	143 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	HSPB9	Q9BQS6	159 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	CHRDL1	Q9BU40	450 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	DERL1	Q9BUN8	251 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	MRPL32	Q9BYC8	188 aa	Known RBP	2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	PRSS22	Q9GZN4	317 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	LPAR2	Q9HBW0	351 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	PLSCR4	Q9NRQ2	329 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	CBLN4	Q9NTU7	201 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	TECR	Q9NZ01	308 aa	Known RBP	2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	CLCF1	Q9UBD9	225 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	UQCR10	Q9UDW1	63 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	TCF19	Q9Y242	345 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	KLF12	Q9Y4X4	402 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	EPPK1	P58107	5090 aa	Known RBP	2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	WNK1	Q9H4A3	2382 aa		2.92	□□□□□ -1.94
CSMD2-208	ENST00000471438	KNTC1	P50748	2209 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	IGKV1D-17	A0A075B6S4	117 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	IGHV2-26	A0A0B4J1V2	119 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	TRBV6-1	A0A0K0K1D8	114 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438		A0A1B0GXF2	115 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FAM231B	A6NCW3	169 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	DPRX	A6NFQ7	191 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	PGPEP1L	A6NFU8	196 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FAM166B	A8MTA8	275 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ZNF705F	A8MVS1	300 aa	Predicted RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438		H0YJW9	148 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	BMPR1B	O00238	502 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	UPK2	O00526	184 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FCN1	O00602	326 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	WNT9B	O14905	357 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ZNF324	O75467	553 aa	Predicted RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FOXH1	O75593	365 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	NDUFB8	O95169	186 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	IGHV3-13	P01766	116 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	GRP	P07492	148 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	NHLRC4	P0CG21	123 aa	Predicted RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ZNF705D	P0CH99	300 aa	Predicted RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ZNF705B	P0CI00	300 aa	Predicted RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	EGR1	P18146	543 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	CBLN1	P23435	193 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	NPY1R	P25929	384 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	MPV17	P39210	176 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	GPR12	P47775	334 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	GABRA2	P47869	451 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ZNF83	P51522	516 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ZNF134	P52741	427 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	EDDM3B	P56851	147 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	UBE2G2	P60604	165 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ERVK-16	P61578	105 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ARG2	P78540	354 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	PRCD	Q00LT1	54 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	SRY	Q05066	204 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	OR5I1	Q13606	314 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	C17orf58	Q2M2W7	97 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ALKBH6	Q3KRA9	238 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	GCSAML	Q5JQS6	135 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	C9orf135	Q5VTT2	229 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	MIC13	Q5XKP0	118 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	OR4A47	Q6IF82	309 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FAM53A	Q6NSI3	398 aa	Predicted RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FAM71F2	Q6NXP2	309 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	TCF23	Q7RTU1	214 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ATP5L2	Q7Z4Y8	100 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	GCNT2	Q8N0V5	402 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ABHD12	Q8N2K0	398 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	GCSAM	Q8N6F7	178 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	KLHDC1	Q8N7A1	406 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	SIGLECL1	Q8N7X8	197 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	C8orf31	Q8N9H6	132 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	THAP8	Q8NA92	274 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	GATD1	Q8NB37	220 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	SLC24A4	Q8NFF2	622 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	OR8B3	Q8NGG8	313 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	OR4A5	Q8NH83	315 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	MRGPRD	Q8TDS7	321 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	KCNS1	Q96KK3	526 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FAM167A-AS1	Q96KT0	104 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FER1L6-AS2	Q96M78	137 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ZNF714	Q96N38	554 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	WFIKKN1	Q96NZ8	548 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	OR8B2	Q96RD0	313 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	S1PR3	Q99500	378 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ATG101	Q9BSB4	218 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	SLC25A33	Q9BSK2	321 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	VAMP8	Q9BV40	100 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	FAM234A	Q9H0X4	552 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	IFI27L2	Q9H2X8	130 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	GNB4	Q9HAV0	340 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	SEPSECS	Q9HD40	501 aa	Known RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	NRN1	Q9NPD7	142 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	HEYL	Q9NQ87	328 aa	Predicted RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	ZNF586	Q9NXT0	402 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	BET1L	Q9NYM9	111 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	SPRR3	Q9UBC9	169 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	PRND	Q9UKY0	176 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	PSG11	Q9UQ72	335 aa		2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	NSD1	Q96L73	2696 aa	Predicted RBP	2.91	□□□□□ -1.94
CSMD2-208	ENST00000471438	OBSCN	Q5VST9	7968 aa		2.9	□□□□□ -1.94
CSMD2-208	ENST00000471438	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	2.9	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms