RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 GATA2P23769 480 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-208ENST00000471322 ASPHD1Q5U4P2 390 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 Q6YL49 198 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-208ENST00000471322 SGMS2Q8NHU3 365 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 PIFOQ8TCI5 191 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 TMEM158Q8WZ71 300 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 SSX3Q99909 188 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 IGLV11-55A0A075B6I3 123 aa13.73□□□□□ -0.21
HSPG2-208ENST00000471322 K7EIM0 57 aa13.73□□□□□ -0.21
HSPG2-208ENST00000471322 EGR2P11161 476 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-208ENST00000471322 ZNF90Q03938 601 aa13.73□□□□□ -0.21
HSPG2-208ENST00000471322 PQLC2Q6ZP29 291 aa13.73□□□□□ -0.21
HSPG2-208ENST00000471322 C5orf56Q8N8D9 126 aa13.73□□□□□ -0.21
HSPG2-208ENST00000471322 TMEM167BQ9NRX6 74 aa13.73□□□□□ -0.21
HSPG2-208ENST00000471322 PSMB11A5LHX3 300 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 M0QZK8 103 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 PAGE4O60829 102 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 C8orf88P0DMB2 117 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 GCHFRP30047 84 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 NPBWR1P48145 328 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 CEBPGP53567 150 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 CD81P60033 236 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 C10orf113Q5VZT2 155 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 MIR17HGQ75NE6 70 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 NIPSNAP3BQ9BS92 247 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 PITPNC1Q9UKF7 332 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 ARL2-SNX15V9GYD0 113 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 TRAV30A0A087WSZ9 112 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 PDE6DO43924 150 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 FAM74A3Q4VXF1 159 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 SPATA31B1PQ5VZV4 182 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 FAM110DQ8TAY7 271 aaPredicted RBP13.72□□□□□ -0.21
HSPG2-208ENST00000471322 TMEM37Q8WXS4 190 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 FANCD2OSQ96PS1 177 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 PRDM13Q9H4Q3 707 aa13.72□□□□□ -0.21
HSPG2-208ENST00000471322 IGHV3-21A0A0B4J1V1 117 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 C11orf94C9JXX5 98 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 H3BQ15 152 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 M0R036 132 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 IGLC1P0CG04 106 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 IER3P46695 156 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 MFAP4P55083 255 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 PLP1P60201 277 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 RHEBQ15382 184 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 KLK9Q2XQG4 91 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 OR4F5Q8NH21 305 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 OR4F4Q96R69 305 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 HSPB9Q9BQS6 159 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 KLK9Q9UKQ9 250 aa13.71□□□□□ -0.22
HSPG2-208ENST00000471322 PUS1Q9Y606 427 aaKnown RBP eCLIP13.71□□□□□ -0.22
HSPG2-208ENST00000471322 HYPMO75409 117 aa13.7□□□□□ -0.22
HSPG2-208ENST00000471322 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
HSPG2-208ENST00000471322 AKIRIN2Q53H80 203 aa13.7□□□□□ -0.22
HSPG2-208ENST00000471322 FAM90A2PQ658T7 463 aa13.7□□□□□ -0.22
HSPG2-208ENST00000471322 C16orf82Q7Z2V1 217 aa13.7□□□□□ -0.22
HSPG2-208ENST00000471322 OR5T1Q8NG75 326 aa13.7□□□□□ -0.22
HSPG2-208ENST00000471322 TVP23CQ96ET8 276 aa13.7□□□□□ -0.22
HSPG2-208ENST00000471322 A6NDX4 124 aa13.69□□□□□ -0.22
HSPG2-208ENST00000471322 F6UZH7 168 aa13.69□□□□□ -0.22
HSPG2-208ENST00000471322 CST9LP1Q5W188 147 aa13.69□□□□□ -0.22
HSPG2-208ENST00000471322 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
HSPG2-208ENST00000471322 STXBP6Q8NFX7 210 aa13.69□□□□□ -0.22
HSPG2-208ENST00000471322 FAM181BA6NEQ2 426 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 H3BUX3 64 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 DNASE2O00115 360 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-208ENST00000471322 ATP6V0E1O15342 81 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 RNASE1P07998 156 aaKnown RBP13.68□□□□□ -0.22
HSPG2-208ENST00000471322 PNRC1Q12796 327 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-208ENST00000471322 LY6EQ16553 131 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 AWAT1Q58HT5 328 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 TMEM219Q86XT9 240 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 TXN2Q99757 166 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 OR7C2O60412 319 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 RD3LP0DJH9 198 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 UBE2G2P60604 165 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 PATE2Q6UY27 113 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 VN1R17PQ8TDU5 208 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 C21orf62Q9NYP8 219 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 DOK5Q9P104 306 aa13.68□□□□□ -0.22
HSPG2-208ENST00000471322 C7orf77A4D0Y5 90 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 ZNF727A8MUV8 499 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 B4DEV8 164 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 CLDN34H7C241 214 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 PSG1P11464 419 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 ORM2P19652 201 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 FCGR2BP31994 310 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-208ENST00000471322 CRIP2P52943 208 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-208ENST00000471322 S100A7AQ86SG5 101 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-208ENST00000471322 OR51G1Q8NGK1 321 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 OR1B1Q8NGR6 318 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 SMCO4Q9NRQ5 59 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 ZNF355PQ9NSJ1 428 aa13.67□□□□□ -0.22
HSPG2-208ENST00000471322 GNG7O60262 68 aa13.66□□□□□ -0.22
HSPG2-208ENST00000471322 IGKV1-17P01599 117 aa13.66□□□□□ -0.22
HSPG2-208ENST00000471322 YPEL3P61236 119 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-208ENST00000471322 ECSCRQ19T08 205 aa13.66□□□□□ -0.22
HSPG2-208ENST00000471322 TIGITQ495A1 244 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms