RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 H3BUA1 57 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 K7EIM0 57 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 ATP6V0E1O15342 81 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 CD5LO43866 347 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 BRI3O95415 125 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 CXorf1O96002 111 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 IGHG2P01859 326 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 IGF1P05019 195 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 OR5G3P0C626 314 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 STAG3L2P0CL84 134 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 STAG3L3P0CL85 134 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 FCGR2BP31994 310 aaPredicted RBP4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 IER3P46695 156 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 TAS2R45P59539 299 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 PLP1P60201 277 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 CCL20P78556 96 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 LY6EQ16553 131 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 ZNF506Q5JVG8 444 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 SLC35E3Q7Z769 313 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 OR5T1Q8NG75 326 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 ATP6V0BQ99437 205 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 TXNDC17Q9BRA2 123 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 SCRT1Q9BWW7 348 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 SEC11CQ9BY50 192 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 MRPL32Q9BYC8 188 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 SLC25A22Q9H936 323 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 DNAJC4Q9NNZ3 241 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 MANBALQ9NQG1 85 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 ZNF355PQ9NSJ1 428 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 GAR1Q9NY12 217 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 C21orf62Q9NYP8 219 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 TECRQ9NZ01 308 aaKnown RBP4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 ZNF580Q9UK33 172 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 FUT9Q9Y231 359 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 DMRT1Q9Y5R6 373 aa4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 SOX21Q9Y651 276 aaPredicted RBP4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 HRNRQ86YZ3 2850 aaPredicted RBP4.76□□□□□ -1.65
SMNDC1-204ENST00000471297 TRAV41A0A0B4J266 112 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 LOC102723971A0A1B0GUV8 181 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 A0A1B0GV50 99 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 F8W036 122 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 AP4M1O00189 453 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 GNG7O60262 68 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 COX7A2P2O60397 106 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 HYPMO75409 117 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 NDUFB8O95169 186 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 TOMM40O96008 361 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 HSPB1P04792 205 aaKnown RBP4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 IGLC1P0CG04 106 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 S100A7P31151 101 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 FGF8P55075 233 aaPredicted RBP4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 YPEL3P61236 119 aaPredicted RBP4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 SCGB2A2Q13296 93 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 ECSCRQ19T08 205 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 C9orf152Q5JTZ5 239 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 C10orf91Q5T1B1 145 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 FAM78BQ5VT40 261 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 PQLC2Q6ZP29 291 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 SSX7Q7RTT5 188 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 S100A7AQ86SG5 101 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 CIARTQ8N365 385 aaPredicted RBP4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 TMEM86BQ8N661 226 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 NECAP1Q8NC96 275 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 SUN5Q8TC36 379 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 NARS2Q96I59 477 aaKnown RBP4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 LINC00052Q96N35 136 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 SLC35B3Q9H1N7 401 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 TMEM160Q9NX00 188 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 MRPL36Q9P0J6 103 aaKnown RBP4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 GNG13Q9P2W3 67 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 VAX2Q9UIW0 290 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 VPREB3Q9UKI3 123 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 RNF24Q9Y225 148 aa4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 CARHSP1Q9Y2V2 147 aaKnown RBP4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 SPTAN1Q13813 2472 aaKnown RBP4.75□□□□□ -1.65
SMNDC1-204ENST00000471297 RELNP78509 3460 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 TRBV7-1A0A0A6YYK4 115 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 IGHV3-21A0A0B4J1V1 117 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 MDFIC2A0A1B0GVS7 189 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 PSMB11A5LHX3 300 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 FAM223BA6NKX1 122 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 LINC01548A6NM66 108 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 OR2J3O76001 311 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 IGHV3-48P01763 117 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 SRP19P09132 144 aaKnown RBP4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 RD3LP0DJH9 198 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 C8orf88P0DMB2 117 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 BCL2P10415 239 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 HNF1AP20823 631 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 GATA2P23769 480 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 SRP14P37108 136 aaKnown RBP4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 ZNF90Q03938 601 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 ATP5G2Q06055 141 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 HAGHQ16775 308 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 TIGITQ495A1 244 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 Q56UQ5 140 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 GCSAMLQ5JQS6 135 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 C10orf113Q5VZT2 155 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 SPNS3Q6ZMD2 512 aa4.74□□□□□ -1.65
SMNDC1-204ENST00000471297 C19orf35Q6ZS72 473 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms