RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TRAV1-1A0A0B4J248 108 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 UPK2O00526 184 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 SSSCA1O60232 199 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 PGLYRP1O75594 196 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-211ENST00000471260 SERPINE2P07093 398 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 DEFA4P12838 97 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 ATP6V0CP27449 155 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 OR2B8PP59922 312 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 LINC00518Q8N0U6 118 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 HSD17B11Q8NBQ5 300 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 OR51H1Q8NH63 302 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 EEF1AKMT3Q96AZ1 226 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 PSMG3Q9BT73 122 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-211ENST00000471260 TECRQ9NZ01 308 aaKnown RBP10.24□□□□□ -0.77
HMGN1-211ENST00000471260 THYN1Q9P016 225 aa10.24□□□□□ -0.77
HMGN1-211ENST00000471260 KMT2CQ8NEZ4 4911 aaKnown RBP10.23□□□□□ -0.77
HMGN1-211ENST00000471260 IGLV11-55A0A075B6I3 123 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 CGB1A6NKQ9 187 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 CYB5BO43169 146 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 NDUFB8O95169 186 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 AREGP15514 252 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 SULT1A1P50225 295 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 POLR2GP62487 172 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMGN1-211ENST00000471260 NHLH2Q02577 135 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 FAM106AQ4KMX7 169 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 AKR1C8PQ5T2L2 129 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 TMEM182Q6ZP80 229 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-211ENST00000471260 OR5C1Q8NGR4 320 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 OR2G3Q8NGZ4 309 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 FAM213BQ8TBF2 198 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 RXFP4Q8TDU9 374 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 EIF5A2Q9GZV4 153 aaKnown RBP10.23□□□□□ -0.77
HMGN1-211ENST00000471260 TMEM140Q9NV12 185 aa10.23□□□□□ -0.77
HMGN1-211ENST00000471260 HUWE1Q7Z6Z7 4374 aaKnown RBP10.23□□□□□ -0.77
HMGN1-211ENST00000471260 A0A087WWC5 75 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 IGLC7A0M8Q6 106 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 FAM24AA6NFZ4 105 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 C2orf70A6NJV1 201 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 MARCH11A6NNE9 402 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 COLCA2A8K830 154 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 C1orf196B1AJZ1 125 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 PPP5D1E7EU14 171 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 IFNA5P01569 189 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 ARL3P36405 182 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 ERVK-16P61578 105 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 HBG1P69891 147 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 HBG2P69892 147 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 S100A12P80511 92 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 CD300EQ496F6 205 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-211ENST00000471260 ZNF506Q5JVG8 444 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 MUC7Q8TAX7 377 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 DYNLRB2Q8TF09 96 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 BSCL2Q96G97 398 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-211ENST00000471260 CCDC140Q96MF4 163 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 TCEAL7Q9BRU2 100 aa10.22□□□□□ -0.77
HMGN1-211ENST00000471260 QTRT1Q9BXR0 403 aaKnown RBP10.22□□□□□ -0.77
HMGN1-211ENST00000471260 TRAV3A0A0B4J244 114 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 C9JQL5 133 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 AGPAT2O15120 278 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 S1PR2O95136 353 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 OR2C1O95371 312 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 S100A8P05109 93 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 DEFB114Q30KQ6 69 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 KHDC3LQ587J8 217 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 CLEC19AQ6UXS0 136 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 ADAMTSL5Q6ZMM2 481 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 OR1L8Q8NGR8 309 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 RNASE11Q8TAA1 199 aaKnown RBP10.21□□□□□ -0.77
HMGN1-211ENST00000471260 SH3BGRL3Q9H299 93 aa10.21□□□□□ -0.77
HMGN1-211ENST00000471260 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.78
HMGN1-211ENST00000471260 C7orf77A4D0Y5 90 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 IZUMO1RA6ND01 250 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 RBFOX3A6NFN3 312 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 ZNF785A8K8V0 405 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 A8MWP6 167 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 REG1AP05451 166 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 CLEC3BP05452 202 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 MYOD1P15172 320 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 TAGLN2P37802 199 aaKnown RBP10.2□□□□□ -0.78
HMGN1-211ENST00000471260 SERF2P84101 59 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 PMS2P11Q13670 270 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 SOHLH1Q5JUK2 328 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 C19orf35Q6ZS72 473 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 IQCF2Q8IXL9 164 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 VN1R17PQ8TDU5 208 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 HIST1H2BAQ96A08 127 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 PINX1Q96BK5 328 aaKnown RBP10.2□□□□□ -0.78
HMGN1-211ENST00000471260 ATP6V0BQ99437 205 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 SAV1Q9H4B6 383 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-211ENST00000471260 RPS10P5Q9NQ39 176 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 FKBP11Q9NYL4 201 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 TIMM9Q9Y5J7 89 aa10.2□□□□□ -0.78
HMGN1-211ENST00000471260 TEX50A0A1B0GTY4 177 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 CXorf65A6NEN9 183 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 B4DEV8 164 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 SYNGR2O43760 224 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 IGHV3-23P01764 117 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 SMIM6P0DI80 62 aa10.19□□□□□ -0.78
HMGN1-211ENST00000471260 CBLN1P23435 193 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms