RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 FUT9Q9Y231 359 aa7.17□□□□□ -1.26
PTPRE-207ENST00000471218 DMRT1Q9Y5R6 373 aa7.17□□□□□ -1.26
PTPRE-207ENST00000471218 NOTCH1P46531 2555 aa7.17□□□□□ -1.26
PTPRE-207ENST00000471218 WNK1Q9H4A3 2382 aa7.17□□□□□ -1.26
PTPRE-207ENST00000471218 IGKV1D-37A0A075B6S9 117 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 IGHV3OR16-10A0A075B7F0 116 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 TRBV7-1A0A0A6YYK4 115 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 TRAV41A0A0B4J266 112 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 TMEM218A2RU14 115 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 ATP6V0E1O15342 81 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 OR2C1O95371 312 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 REG1AP05451 166 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 IGLC1P0CG04 106 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 STAG3L2P0CL84 134 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 STAG3L3P0CL85 134 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 BCL2P10415 239 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 ZNF726P1Q15940 193 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 GUK1Q16774 197 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 FBLN7Q53RD9 439 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 TOR2AQ5JU69 321 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 C10orf91Q5T1B1 145 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 MIC13Q5XKP0 118 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 UNQ5815/PRO19632Q6UWF5 114 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 SLC35E3Q7Z769 313 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 BCL6BQ8N143 479 aaPredicted RBP7.16□□□□□ -1.26
PTPRE-207ENST00000471218 WFDC12Q8WWY7 111 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 CITED1Q99966 193 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 HSPB9Q9BQS6 159 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 SEC11CQ9BY50 192 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 NKX6-2Q9C056 277 aaPredicted RBP7.16□□□□□ -1.26
PTPRE-207ENST00000471218 NPFFR1Q9GZQ6 430 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 DNAJC4Q9NNZ3 241 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 TMEM167BQ9NRX6 74 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 C21orf62Q9NYP8 219 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 TECRQ9NZ01 308 aaKnown RBP7.16□□□□□ -1.26
PTPRE-207ENST00000471218 VAX2Q9UIW0 290 aa7.16□□□□□ -1.26
PTPRE-207ENST00000471218 CARHSP1Q9Y2V2 147 aaKnown RBP7.16□□□□□ -1.26
PTPRE-207ENST00000471218 PSMB11A5LHX3 300 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 FAM181BA6NEQ2 426 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 RBFOX3A6NFN3 312 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 TMEM250H0YL14 139 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 HOXA3O43365 443 aaPredicted RBP7.15□□□□□ -1.26
PTPRE-207ENST00000471218 COX7A2P2O60397 106 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 TOMM40O96008 361 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 Q8N2B8 174 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 OR2T6Q8NHC8 308 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 PCNPQ8WW12 178 aaKnown RBP7.15□□□□□ -1.26
PTPRE-207ENST00000471218 SCRT1Q9BWW7 348 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 SLC35B3Q9H1N7 401 aa7.15□□□□□ -1.26
PTPRE-207ENST00000471218 A0A0G2JLM5 398 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 LOC102723971A0A1B0GUV8 181 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 PDE6DO43924 150 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 HYPMO75409 117 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 NDUFB8O95169 186 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 IGKV1-17P01599 117 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 C8orf88P0DMB2 117 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 PAX6P26367 422 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 RAB9AP51151 201 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 FAM122CQ6P4D5 195 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 REC114Q7Z4M0 266 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 TMEM219Q86XT9 240 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 SVBPQ8N300 66 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 OR51G1Q8NGK1 321 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 ZNF502Q8TBZ5 544 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 EEF1AKMT3Q96AZ1 226 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 FAM103A1Q9BTL3 118 aaKnown RBP7.14□□□□□ -1.27
PTPRE-207ENST00000471218 PRSS22Q9GZN4 317 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 EIF5A2Q9GZV4 153 aaKnown RBP7.14□□□□□ -1.27
PTPRE-207ENST00000471218 VSIRQ9H7M9 311 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 SLC25A22Q9H936 323 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 RNF114Q9Y508 228 aa7.14□□□□□ -1.27
PTPRE-207ENST00000471218 NUPL2O15504 423 aaKnown RBP7.13□□□□□ -1.27
PTPRE-207ENST00000471218 GNG7O60262 68 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 IGLV1-40P01703 118 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 IGHV4-59P01825 116 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 IGHG4P01861 327 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 RD3LP0DJH9 198 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 PPIFP30405 207 aaKnown RBP7.13□□□□□ -1.27
PTPRE-207ENST00000471218 RHOGP84095 191 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 MEF2BQ02080 365 aaPredicted RBP7.13□□□□□ -1.27
PTPRE-207ENST00000471218 CFHR3Q02985 330 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 RELQ04864 619 aaPredicted RBP7.13□□□□□ -1.27
PTPRE-207ENST00000471218 ECSCRQ19T08 205 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 FAM74A3Q4VXF1 159 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 FAM78BQ5VT40 261 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 C10orf113Q5VZT2 155 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 LCN15Q6UWW0 184 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 CCDC28AQ8IWP9 274 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 Q8WTZ3 238 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 NARS2Q96I59 477 aaKnown RBP7.13□□□□□ -1.27
PTPRE-207ENST00000471218 TREM1Q9NP99 234 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 FBXL7Q9UJT9 491 aa7.13□□□□□ -1.27
PTPRE-207ENST00000471218 A0A1W2PRE2 83 aa7.12□□□□□ -1.27
PTPRE-207ENST00000471218 F6UZH7 168 aa7.12□□□□□ -1.27
PTPRE-207ENST00000471218 ARL14EPLP0DKL9 152 aa7.12□□□□□ -1.27
PTPRE-207ENST00000471218 GCHFRP30047 84 aa7.12□□□□□ -1.27
PTPRE-207ENST00000471218 SLC35B1P78383 322 aa7.12□□□□□ -1.27
PTPRE-207ENST00000471218 ICAM4Q14773 271 aa7.12□□□□□ -1.27
PTPRE-207ENST00000471218 MLANAQ16655 118 aa7.12□□□□□ -1.27
PTPRE-207ENST00000471218 C15orf32Q32M92 178 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms