RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PRSS29PA6NIE9 313 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 EXOC3-AS1Q8N2X6 119 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 SMRP1Q8NCR6 262 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 LINC00477Q96M19 166 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 RBM38Q9H0Z9 239 aaKnown RBP5.71□□□□□ -1.5
BRCA1-210ENST00000471181 CACNA1SQ13698 1873 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 TEX48A0A1B0GUV7 120 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 COX6A1P12074 109 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 MCRIP2Q9BUT9 160 aaKnown RBP5.71□□□□□ -1.5
BRCA1-210ENST00000471181 OSTCQ9NRP0 149 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 TRBV5-7A0A0A0MS05 114 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 TIMM23O14925 209 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 CRYGCP07315 174 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 LINC01465Q8N7H1 131 aa5.71□□□□□ -1.5
BRCA1-210ENST00000471181 A0A096LPF7 62 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 KNCNA6PVL3 124 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 Q6ZT83 130 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 OCC1Q8TAD7 63 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 MBNL3Q9NUK0 354 aaKnown RBP5.7□□□□□ -1.5
BRCA1-210ENST00000471181 IGHV2OR16-5A0A0B4J2B6 119 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 TNFSF13O75888 250 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 IGHG2P01859 326 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 SUPT4H1P63272 117 aaKnown RBP5.7□□□□□ -1.5
BRCA1-210ENST00000471181 UTF1Q5T230 341 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 VMO1Q7Z5L0 202 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 Q8TAT8 98 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 TIMM17AQ99595 171 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 MYO9BQ13459 2157 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 CD55P08174 381 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 CEACAM1P13688 526 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 CLPSL2Q6UWE3 100 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 PPP1R3EQ9H7J1 279 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 C1orf53Q5VUE5 145 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 PPP1R32Q7Z5V6 425 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 ATP6V0BQ99437 205 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 SRSF8Q9BRL6 282 aaKnown RBP5.7□□□□□ -1.5
BRCA1-210ENST00000471181 C1QTNF4Q9BXJ3 329 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 TMEM133Q9H2Q1 129 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 NPDC1Q9NQX5 325 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-210ENST00000471181 CARHSP1Q9Y2V2 147 aaKnown RBP5.7□□□□□ -1.5
BRCA1-210ENST00000471181 ID3Q02535 119 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 RNF166Q96A37 237 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-210ENST00000471181 RMI2Q96E14 147 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 ZNF319Q9P2F9 582 aa5.7□□□□□ -1.5
BRCA1-210ENST00000471181 MYO5AQ9Y4I1 1855 aaKnown RBP5.7□□□□□ -1.5
BRCA1-210ENST00000471181 PMS2P5A8MQ11 134 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 NGFRP08138 427 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 CELA3AP09093 270 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 POU2AF1Q16633 256 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 C15orf32Q32M92 178 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 DKK4Q9UBT3 224 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 RPUSD1Q9UJJ7 312 aaKnown RBP5.69□□□□□ -1.5
BRCA1-210ENST00000471181 TRBV25-1A0A075B6N4 114 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 GAGE12HA6NDE8 117 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 SHISA9B4DS77 424 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 PRSS23O95084 383 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 CELA3BP08861 270 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 KLRD1Q13241 179 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 MRPS18AQ9NVS2 196 aaKnown RBP5.69□□□□□ -1.5
BRCA1-210ENST00000471181 PILRAQ9UKJ1 303 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 PDE4DIPQ5VU43 2346 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 RAMP3O60896 148 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 PIP4P2Q8N4L2 257 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 C17orf100A8MU93 164 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 A8MWP6 167 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 SP7Q8TDD2 431 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-210ENST00000471181 RPL18AQ02543 176 aaKnown RBP5.69□□□□□ -1.5
BRCA1-210ENST00000471181 TSSC4Q9Y5U2 329 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-210ENST00000471181 LOC285556D6RIA3 1793 aa5.69□□□□□ -1.5
BRCA1-210ENST00000471181 PCM1Q15154 2024 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 IGHV3-38A0A0C4DH36 116 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 CRYBA4P53673 196 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 PAX9P55771 341 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 SRSF3P84103 164 aaKnown RBP5.68□□□□□ -1.5
BRCA1-210ENST00000471181 LINC01559Q495D7 138 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 PLPPR1Q8TBJ4 325 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 A0A0G2JK05 382 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 GAGE12BA1L429 117 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 ZNF138P52744 262 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 SYNJ2BPP57105 145 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 EFNB3Q15768 340 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 VWC2Q2TAL6 325 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 ANKRD39Q53RE8 183 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 SPATA31B1PQ5VZV4 182 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 LIMS2Q7Z4I7 341 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 ADAMTSL1Q8N6G6 1762 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 IGKV1OR2-108A0A075B7D4 117 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 TMEM14DPA8MWL7 114 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 GAGE7O76087 117 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 DKK1O94907 266 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 GAGE12FP0CL80 117 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 GAGE12GP0CL81 117 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 GAGE12IP0CL82 117 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 NOVP48745 357 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 FAM166AQ6J272 317 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 LCN12Q6JVE5 192 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 NEGR1Q7Z3B1 354 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 RPRMLQ8N4K4 120 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 SS18L2Q9UHA2 77 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 SIPA1L1O43166 1804 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms