RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 FAM90A26D6RGX4 464 aa22.74■■□□□ 1.23
HMG20B-209ENST00000470356 MIFP14174 115 aa22.74■■□□□ 1.23
HMG20B-209ENST00000470356 OR1S1Q8NH92 325 aa22.74■■□□□ 1.23
HMG20B-209ENST00000470356 NRN1Q9NPD7 142 aa22.74■■□□□ 1.23
HMG20B-209ENST00000470356 IGHV4-28A0A0C4DH34 117 aa22.73■■□□□ 1.23
HMG20B-209ENST00000470356 RBMY1A1P0DJD3 496 aaKnown RBP22.73■■□□□ 1.23
HMG20B-209ENST00000470356 RBMY1CP0DJD4 496 aa22.73■■□□□ 1.23
HMG20B-209ENST00000470356 GPX4P36969 197 aaPredicted RBP22.73■■□□□ 1.23
HMG20B-209ENST00000470356 SNRPD3P62318 126 aaKnown RBP22.73■■□□□ 1.23
HMG20B-209ENST00000470356 RBMY1FQ15415 496 aaKnown RBP22.73■■□□□ 1.23
HMG20B-209ENST00000470356 SIGLEC15Q6ZMC9 328 aa22.73■■□□□ 1.23
HMG20B-209ENST00000470356 RPP25LQ8N5L8 163 aaKnown RBP22.73■■□□□ 1.23
HMG20B-209ENST00000470356 OR51G1Q8NGK1 321 aa22.73■■□□□ 1.23
HMG20B-209ENST00000470356 C2CD4CQ8TF44 421 aa22.73■■□□□ 1.23
HMG20B-209ENST00000470356 TMEM128Q5BJH2 165 aa22.72■■□□□ 1.23
HMG20B-209ENST00000470356 CSNK1G2-AS1Q8NCQ2 148 aa22.72■■□□□ 1.23
HMG20B-209ENST00000470356 TRIM63Q969Q1 353 aa22.72■■□□□ 1.23
HMG20B-209ENST00000470356 RNF125Q96EQ8 232 aa22.72■■□□□ 1.23
HMG20B-209ENST00000470356 DUXBA0A1W2PPF3 345 aa22.71■■□□□ 1.23
HMG20B-209ENST00000470356 TCTAP57738 103 aa22.71■■□□□ 1.23
HMG20B-209ENST00000470356 AP3S2P59780 193 aa22.71■■□□□ 1.23
HMG20B-209ENST00000470356 GAMTQ14353 236 aa22.71■■□□□ 1.23
HMG20B-209ENST00000470356 X6R8D5 127 aa22.71■■□□□ 1.23
HMG20B-209ENST00000470356 PITX3O75364 302 aa22.7■■□□□ 1.22
HMG20B-209ENST00000470356 NUP62P37198 522 aaPredicted RBP22.7■■□□□ 1.22
HMG20B-209ENST00000470356 TMED4Q7Z7H5 227 aa22.7■■□□□ 1.22
HMG20B-209ENST00000470356 PFDN2Q9UHV9 154 aa22.7■■□□□ 1.22
HMG20B-209ENST00000470356 C11orf94C9JXX5 98 aa22.69■■□□□ 1.22
HMG20B-209ENST00000470356 PYDC2Q56P42 97 aa22.69■■□□□ 1.22
HMG20B-209ENST00000470356 TOMM5Q8N4H5 51 aa22.69■■□□□ 1.22
HMG20B-209ENST00000470356 CLEC5AQ9NY25 188 aa22.69■■□□□ 1.22
HMG20B-209ENST00000470356 TBC1D24Q9ULP9 559 aa22.69■■□□□ 1.22
HMG20B-209ENST00000470356 FRAS1Q86XX4 4008 aa22.69■■□□□ 1.22
HMG20B-209ENST00000470356 IGKV1D-37A0A075B6S9 117 aa22.68■■□□□ 1.22
HMG20B-209ENST00000470356 ZFP92A6NM28 416 aa22.68■■□□□ 1.22
HMG20B-209ENST00000470356 DEDDO75618 318 aa22.68■■□□□ 1.22
HMG20B-209ENST00000470356 OR8G2PQ6IF36 304 aa22.68■■□□□ 1.22
HMG20B-209ENST00000470356 LRTM2Q8N967 370 aa22.68■■□□□ 1.22
HMG20B-209ENST00000470356 SLC35E1Q96K37 410 aa22.68■■□□□ 1.22
HMG20B-209ENST00000470356 NUTF2P61970 127 aaKnown RBP22.67■■□□□ 1.22
HMG20B-209ENST00000470356 PBDC1Q9BVG4 233 aa22.67■■□□□ 1.22
HMG20B-209ENST00000470356 V9GYH0 126 aa22.67■■□□□ 1.22
HMG20B-209ENST00000470356 H3BMM0 161 aa22.66■■□□□ 1.22
HMG20B-209ENST00000470356 SLC25A6P12236 298 aa22.66■■□□□ 1.22
HMG20B-209ENST00000470356 ZNF90Q03938 601 aa22.66■■□□□ 1.22
HMG20B-209ENST00000470356 DEDD2Q8WXF8 326 aa22.66■■□□□ 1.22
HMG20B-209ENST00000470356 SLC25A21Q9BQT8 299 aaPredicted RBP22.66■■□□□ 1.22
HMG20B-209ENST00000470356 C1QTNF4Q9BXJ3 329 aa22.66■■□□□ 1.22
HMG20B-209ENST00000470356 FABP1P07148 127 aa22.65■■□□□ 1.22
HMG20B-209ENST00000470356 HLA-DMBP28068 263 aa22.65■■□□□ 1.22
HMG20B-209ENST00000470356 ELOA3CA0A087WX78 387 aaPredicted RBP22.64■■□□□ 1.21
HMG20B-209ENST00000470356 VAMP1P23763 118 aa22.64■■□□□ 1.21
HMG20B-209ENST00000470356 NKX2-1P43699 371 aaPredicted RBP22.64■■□□□ 1.21
HMG20B-209ENST00000470356 RAB11AP62491 216 aa22.64■■□□□ 1.21
HMG20B-209ENST00000470356 ZNF79Q15937 498 aa22.63■■□□□ 1.21
HMG20B-209ENST00000470356 C1orf194Q5T5A4 169 aa22.63■■□□□ 1.21
HMG20B-209ENST00000470356 APLNQ9ULZ1 77 aa22.63■■□□□ 1.21
HMG20B-209ENST00000470356 VPS13DQ5THJ4 4388 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 SNRPGP15A8MWD9 76 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 IGLL5B9A064 214 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 MED6O75586 246 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 HLA-DRB4P13762 266 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 S100A5P33763 92 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 TRGV9Q99603 122 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 XCL2Q9UBD3 114 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 TMED3Q9Y3Q3 217 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 HLA-DRB4X5D2U9 266 aa22.62■■□□□ 1.21
HMG20B-209ENST00000470356 IAPPP10997 89 aa22.61■■□□□ 1.21
HMG20B-209ENST00000470356 CENPSQ8N2Z9 138 aa22.61■■□□□ 1.21
HMG20B-209ENST00000470356 SFT2D2O95562 160 aa22.6■■□□□ 1.21
HMG20B-209ENST00000470356 LYZP61626 148 aa22.6■■□□□ 1.21
HMG20B-209ENST00000470356 Q6ZTC4 211 aa22.6■■□□□ 1.21
HMG20B-209ENST00000470356 WDR12Q9GZL7 423 aaKnown RBP22.6■■□□□ 1.21
HMG20B-209ENST00000470356 TRAV10A0A0B4J240 114 aa22.59■■□□□ 1.21
HMG20B-209ENST00000470356 PPP1R1AQ13522 171 aa22.59■■□□□ 1.21
HMG20B-209ENST00000470356 OR2F1Q13607 317 aa22.59■■□□□ 1.21
HMG20B-209ENST00000470356 CCDC190Q86UF4 302 aa22.59■■□□□ 1.21
HMG20B-209ENST00000470356 THAP8Q8NA92 274 aa22.59■■□□□ 1.21
HMG20B-209ENST00000470356 CIB3Q96Q77 187 aaPredicted RBP22.59■■□□□ 1.21
HMG20B-209ENST00000470356 ID1P41134 155 aa22.58■■□□□ 1.21
HMG20B-209ENST00000470356 RPP30P78346 268 aaKnown RBP22.58■■□□□ 1.21
HMG20B-209ENST00000470356 PRR20EP86478 221 aa22.58■■□□□ 1.21
HMG20B-209ENST00000470356 PRR20CP86479 221 aa22.58■■□□□ 1.21
HMG20B-209ENST00000470356 PRR20DP86480 221 aa22.58■■□□□ 1.21
HMG20B-209ENST00000470356 PRR20BP86481 221 aa22.58■■□□□ 1.21
HMG20B-209ENST00000470356 PRR20AP86496 221 aa22.58■■□□□ 1.21
HMG20B-209ENST00000470356 PAIP2BQ9ULR5 123 aaKnown RBP22.58■■□□□ 1.21
HMG20B-209ENST00000470356 IGKV1OR2-108A0A075B7D4 117 aa22.57■■□□□ 1.2
HMG20B-209ENST00000470356 SYNGR2O43760 224 aa22.57■■□□□ 1.2
HMG20B-209ENST00000470356 PSMB3P49720 205 aa22.57■■□□□ 1.2
HMG20B-209ENST00000470356 LINC00052Q96N35 136 aa22.57■■□□□ 1.2
HMG20B-209ENST00000470356 MAGT1Q9H0U3 335 aa22.57■■□□□ 1.2
HMG20B-209ENST00000470356 DNAH10Q8IVF4 4471 aa22.56■■□□□ 1.2
HMG20B-209ENST00000470356 CCDC160A6NGH7 325 aa22.56■■□□□ 1.2
HMG20B-209ENST00000470356 SOCS3O14543 225 aa22.56■■□□□ 1.2
HMG20B-209ENST00000470356 GDF5OSQ5U4N7 250 aa22.56■■□□□ 1.2
HMG20B-209ENST00000470356 PPP1R14BQ96C90 147 aa22.56■■□□□ 1.2
HMG20B-209ENST00000470356 SAV1Q9H4B6 383 aaPredicted RBP22.56■■□□□ 1.2
HMG20B-209ENST00000470356 CFDP00746 253 aaPredicted RBP22.55■■□□□ 1.2
HMG20B-209ENST00000470356 FOXI2Q6ZQN5 318 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms