RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ZNF492Q9P255 531 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 SIGLEC9Q9Y336 463 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 ASPMQ8IZT6 3477 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 CNOT1A5YKK6 2376 aaKnown RBP10.91□□□□□ -0.66
BRCA1-209ENST00000470026 C19orf71A6NCJ1 209 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 PGPA6NDG6 321 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 HYPMO75409 117 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 LTAP01374 205 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 SLC25A5P05141 298 aaKnown RBP10.91□□□□□ -0.66
BRCA1-209ENST00000470026 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
BRCA1-209ENST00000470026 ORM2P19652 201 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 HCP5Q6MZN7 132 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 C5orf17Q8NAS9 161 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 OR1B1Q8NGR6 318 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 C8orf46Q8TAG6 207 aa10.91□□□□□ -0.66
BRCA1-209ENST00000470026 UBE2G1P62253 170 aa10.9□□□□□ -0.66
BRCA1-209ENST00000470026 PRSS33Q8NF86 280 aa10.9□□□□□ -0.66
BRCA1-209ENST00000470026 C22orf15Q8WYQ4 148 aa10.9□□□□□ -0.66
BRCA1-209ENST00000470026 FMC1Q96HJ9 113 aa10.9□□□□□ -0.66
BRCA1-209ENST00000470026 F11RQ9Y624 299 aaKnown RBP10.9□□□□□ -0.66
BRCA1-209ENST00000470026 IGHV2-26A0A0B4J1V2 119 aa10.9□□□□□ -0.67
BRCA1-209ENST00000470026 IGHV3-72A0A0B4J1Y9 119 aa10.9□□□□□ -0.67
BRCA1-209ENST00000470026 IGHV1-69-2A0A0G2JMI3 117 aa10.9□□□□□ -0.67
BRCA1-209ENST00000470026 TEX22C9J3V5 150 aa10.9□□□□□ -0.67
BRCA1-209ENST00000470026 MMDQ15546 238 aa10.9□□□□□ -0.67
BRCA1-209ENST00000470026 ABHD17AQ96GS6 310 aa10.9□□□□□ -0.67
BRCA1-209ENST00000470026 DYNLRB1Q9NP97 96 aa10.9□□□□□ -0.67
BRCA1-209ENST00000470026 SOX21Q9Y651 276 aaPredicted RBP10.9□□□□□ -0.67
BRCA1-209ENST00000470026 ENSAO43768 121 aaKnown RBP10.89□□□□□ -0.67
BRCA1-209ENST00000470026 CNTFRP26992 372 aa10.89□□□□□ -0.67
BRCA1-209ENST00000470026 TNXAQ16473 311 aa10.89□□□□□ -0.67
BRCA1-209ENST00000470026 SPATA45Q537H7 98 aa10.89□□□□□ -0.67
BRCA1-209ENST00000470026 LINC00322Q6ZN03 302 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-209ENST00000470026 FAM19A2Q8N3H0 131 aa10.89□□□□□ -0.67
BRCA1-209ENST00000470026 RBM14Q96PK6 669 aaKnown RBP10.89□□□□□ -0.67
BRCA1-209ENST00000470026 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
BRCA1-209ENST00000470026 NGBQ9NPG2 151 aa10.89□□□□□ -0.67
BRCA1-209ENST00000470026 IGHV1-3A0A0C4DH29 117 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 TCRAP04437 139 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 IGLC2P0DOY2 106 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 IGLC3P0DOY3 106 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 GAGE1Q13065 139 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 PRR27Q6MZM9 219 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 TMEM190Q8WZ59 177 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 GFRA4Q9GZZ7 299 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 TMEM14CQ9P0S9 112 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 RALYQ9UKM9 306 aaKnown RBP10.88□□□□□ -0.67
BRCA1-209ENST00000470026 PLXNB1O43157 2135 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 BUB1B-PAK6H3BSN5 160 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 RBP4P02753 201 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 HOXB4P17483 251 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-209ENST00000470026 GFRALQ6UXV0 394 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 BORCS7Q96B45 105 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 CLEC7AQ9BXN2 247 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 Q9H3A6 140 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 UQCR10Q9UDW1 63 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 ZGRF1Q86YA3 2104 aa10.88□□□□□ -0.67
BRCA1-209ENST00000470026 TRBV6-1A0A0K0K1D8 114 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 FAM231BA6NCW3 169 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 A8MWL6 223 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 FAM87AP0C7U9 286 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 IGLC1P0CG04 106 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 APOBEC3AP31941 199 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-209ENST00000470026 PPP1R27Q86WC6 154 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 OR8B3Q8NGG8 313 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 URB1-AS1Q96HZ7 61 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 OR8B2Q96RD0 313 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 RNF5Q99942 180 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 SRSF8Q9BRL6 282 aaKnown RBP10.87□□□□□ -0.67
BRCA1-209ENST00000470026 B9A039 149 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 I3L2K1 104 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 HBBP68871 147 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 PMCHL1Q16048 86 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 C16orf54Q6UWD8 224 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 GTSF1Q8WW33 167 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 OTORQ9NRC9 128 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 INSIG2Q9Y5U4 225 aa10.87□□□□□ -0.67
BRCA1-209ENST00000470026 FAM181BA6NEQ2 426 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 LY6LH3BQJ8 138 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 DLEU1O43261 78 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 HSBP1O75506 76 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 ZNF25P17030 456 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-209ENST00000470026 RBPJQ06330 500 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 TCF15Q12870 199 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 TMEM208Q9BTX3 173 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-209ENST00000470026 LPAR2Q9HBW0 351 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 HIGD1AQ9Y241 93 aa10.86□□□□□ -0.67
BRCA1-209ENST00000470026 BOD1L1Q8NFC6 3051 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 NTF3P20783 257 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 FAM162BQ5T6X4 162 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 EBLN2Q6P2I7 272 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 TCF24Q7RTU0 167 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 LHFPL4Q7Z7J7 247 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 SGK494Q96LW2 274 aa10.85□□□□□ -0.67
BRCA1-209ENST00000470026 MALRD1Q5VYJ5 2156 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms