RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 NPBWR1P48145 328 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 RAB11AP62491 216 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 PRCDQ00LT1 54 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 SMCO1Q147U7 214 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 TCTEX1D4Q5JR98 221 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 C10orf55Q5SWW7 151 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 LCN12Q6JVE5 192 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 Q6ZTC4 211 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 GTSCR1Q86UQ5 136 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 DUSP18Q8NEJ0 188 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 OR1P1Q8NH06 330 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 VN1R17PQ8TDU5 208 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 PINX1Q96BK5 328 aaKnown RBP4.76□□□□□ -1.65
PTCD3-208ENST00000469585 GALNT14Q96FL9 552 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 BSCL2Q96G97 398 aaPredicted RBP4.76□□□□□ -1.65
PTCD3-208ENST00000469585 SEC22AQ96IW7 307 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 TP53RKQ96S44 253 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 TMEM14BQ9NUH8 114 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 SHPKQ9UHJ6 478 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 PAIP2BQ9ULR5 123 aaKnown RBP4.76□□□□□ -1.65
PTCD3-208ENST00000469585 NSG2Q9Y328 171 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 UFC1Q9Y3C8 167 aa4.76□□□□□ -1.65
PTCD3-208ENST00000469585 F11RQ9Y624 299 aaKnown RBP4.76□□□□□ -1.65
PTCD3-208ENST00000469585 TRAV30A0A087WSZ9 112 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.75□□□□□ -1.65
PTCD3-208ENST00000469585 TEX50A0A1B0GTY4 177 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 A0A1B0GU03 582 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 I3L521 148 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 DFFBO76075 338 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 YIF1AO95070 293 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 NDUFB6O95139 128 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 CDS2O95674 445 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 IFNA4P05014 189 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 CRYGCP07315 174 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 AREGP15514 252 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 CTRB1P17538 263 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 PVALBP20472 110 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-208ENST00000469585 OPRK1P41145 380 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 EIF2B2P49770 351 aaKnown RBP4.75□□□□□ -1.65
PTCD3-208ENST00000469585 ATP5IP56385 69 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-208ENST00000469585 DLK1P80370 383 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 DEFA6Q01524 100 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 ZNF79Q15937 498 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 ANKRD55Q3KP44 614 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 DEFB121Q5J5C9 76 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 CTRB2Q6GPI1 263 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 ZNF343Q6P1L6 599 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 S100A7AQ86SG5 101 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 OR52E5Q8NH55 327 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 MRAPQ8TCY5 172 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 DUX3Q96PT4 197 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 ATP6V0BQ99437 205 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 TXN2Q99757 166 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 SOSTQ9BQB4 213 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 GINS3Q9BRX5 216 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 RTBDNQ9BSG5 229 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-208ENST00000469585 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 C5orf66Q9H5L9 145 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 TMEM231Q9H6L2 316 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 NDUFA4L2Q9NRX3 87 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 C21orf62Q9NYP8 219 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 CACNG5Q9UF02 275 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 FBXO7Q9Y3I1 522 aa4.75□□□□□ -1.65
PTCD3-208ENST00000469585 A0A087WW49 117 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 L7N2F9 121 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 ST8SIA3O43173 380 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 SOX15O60248 233 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 SFT2D2O95562 160 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 PRH1P02810 166 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 CD5P06127 495 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 SLC25A4P12235 298 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 SLC25A6P12236 298 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 NUP62P37198 522 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-208ENST00000469585 SYNJ2BPP57105 145 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 ZNF876PQ49A33 203 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 PDLIM3Q53GG5 364 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-208ENST00000469585 LAMTOR1Q6IAA8 161 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 CLEC19AQ6UXS0 136 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 SELENOHQ8IZQ5 122 aaKnown RBP4.74□□□□□ -1.65
PTCD3-208ENST00000469585 UXS1Q8NBZ7 420 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 WFDC9Q8NEX5 89 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 OR9G4Q8NGQ1 327 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 OCC1Q8TAD7 63 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 MYOZ3Q8TDC0 251 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 DTD1Q8TEA8 209 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 GLYATL2Q8WU03 294 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 MARC2Q969Z3 335 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 SLC35E1Q96K37 410 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 C20orf85Q9H1P6 137 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 TMEM56-RWDD3S4R434 201 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 U3KQ87 197 aa4.74□□□□□ -1.65
PTCD3-208ENST00000469585 TRBV9A0A0B4J1U6 114 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 TRAV3A0A0B4J244 114 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 IGLC7A0M8Q6 106 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 C5orf51A6NDU8 294 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 OR2T8A6NH00 312 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 FAM25EA8MYX2 175 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 G3V4G9 280 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 UPK1BO75841 260 aa4.73□□□□□ -1.65
PTCD3-208ENST00000469585 TCRBP04435 133 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms