RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 A0A087WW49 117 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 IGHV3-35A0A0C4DH35 117 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 ZNF320A2RRD8 509 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 BOLA2-SMG1P6H3BVE0 249 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 I3L521 148 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 CCL24O00175 119 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 BMPR1BO00238 502 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 AGPAT2O15120 278 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 TOMM40O96008 361 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 CFDP00746 253 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-216ENST00000468949 TRBV12-3P01733 135 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 IGLC1P0CG04 106 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 RD3LP0DJH9 198 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 TPT1P13693 172 aaKnown RBP6.27□□□□□ -1.41
HDAC6-216ENST00000468949 CXCL2P19875 107 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 HOXD3P31249 432 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-216ENST00000468949 BMI1P35226 326 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 LYZP61626 148 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 RUNX1Q01196 453 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 VWC2Q2TAL6 325 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 PRR31Q5SQ13 230 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 HIST2H2BDQ6DRA6 164 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 Q6ZRG5 221 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 CYP2G1PQ6ZSU1 146 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 C18orf65Q6ZTR6 163 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 THAP8Q8NA92 274 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 HSD17B11Q8NBQ5 300 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 OR51G1Q8NGK1 321 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 GNPNAT1Q96EK6 184 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-216ENST00000468949 NPCDR1Q9BY65 106 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 WDR61Q9GZS3 305 aaKnown RBP6.27□□□□□ -1.41
HDAC6-216ENST00000468949 PFDN2Q9UHV9 154 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 WDR83OSQ9Y284 106 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 TENM1Q9UKZ4 2725 aa6.27□□□□□ -1.41
HDAC6-216ENST00000468949 NDUFA4O00483 81 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 COX7A2P2O60397 106 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 OR2C1O95371 312 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 TSPAN15O95858 294 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 IL4P05112 153 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 LINC00869P0C866 280 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 MYCNOSP40205 109 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 KRTAP10-3P60369 221 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 YPEL3P61236 119 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-216ENST00000468949 B2MP61769 119 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 KIAA0141Q14154 515 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-216ENST00000468949 RPL7L1Q6DKI1 246 aaKnown RBP6.26□□□□□ -1.41
HDAC6-216ENST00000468949 EIF5AL1Q6IS14 154 aaKnown RBP6.26□□□□□ -1.41
HDAC6-216ENST00000468949 C1QL4Q86Z23 238 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 C9orf62Q8N4C0 152 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 OR1B1Q8NGR6 318 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 DUX3Q96PT4 197 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 METTL26Q96S19 204 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 MGST2Q99735 147 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 CHRDL1Q9BU40 450 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 GGTLC1Q9BX51 225 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 PARD6GQ9BYG4 376 aaPredicted RBP6.26□□□□□ -1.41
HDAC6-216ENST00000468949 MRPL36Q9P0J6 103 aaKnown RBP6.26□□□□□ -1.41
HDAC6-216ENST00000468949 PEMTQ9UBM1 199 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 UFC1Q9Y3C8 167 aa6.26□□□□□ -1.41
HDAC6-216ENST00000468949 PUS1Q9Y606 427 aaKnown RBP eCLIP6.26□□□□□ -1.41
HDAC6-216ENST00000468949 F8W735 103 aaPredicted RBP6.25□□□□□ -1.41
HDAC6-216ENST00000468949 IGKV1-17P01599 117 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 CTSGP08311 255 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 OR5G3P0C626 314 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 PSG1P11464 419 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 ORM2P19652 201 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 SLURP1P55000 103 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 ELLP55199 621 aaPredicted RBP6.25□□□□□ -1.41
HDAC6-216ENST00000468949 SYNJ2BPP57105 145 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 ZNF90Q03938 601 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 OPCMLQ14982 345 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 LGALSLQ3ZCW2 172 aaPredicted RBP6.25□□□□□ -1.41
HDAC6-216ENST00000468949 FFAR4Q5NUL3 377 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 AKR1C8PQ5T2L2 129 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 SLC51BQ86UW2 128 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 STPG3Q8N7X2 389 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 OR1L4Q8NGR5 311 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 RNF125Q96EQ8 232 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 RAX2Q96IS3 184 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 PFDN5Q99471 154 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 RSG1Q9BU20 258 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 ELOVL1Q9BW60 279 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 TMEM231Q9H6L2 316 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 DOK5Q9P104 306 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 RABAC1Q9UI14 185 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 RNF24Q9Y225 148 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 PXMP4Q9Y6I8 212 aa6.25□□□□□ -1.41
HDAC6-216ENST00000468949 IGKV1D-37A0A075B6S9 117 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 IGKV1OR2-108A0A075B7D4 117 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 IGHV3OR16-8A0A075B7F1 116 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 OVOL1O14753 267 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 MBP02144 154 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 ATP6V0CP27449 155 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 ADMP35318 185 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 RPL29P47914 159 aaKnown RBP6.24□□□□□ -1.41
HDAC6-216ENST00000468949 ACOT6Q3I5F7 207 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-216ENST00000468949 PXDC1Q5TGL8 231 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 MIC13Q5XKP0 118 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 GPHB5Q86YW7 130 aa6.24□□□□□ -1.41
HDAC6-216ENST00000468949 OR2G3Q8NGZ4 309 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms