RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SCGB2A1O75556 95 aa14.83□□□□□ -0.03
SMC4-209ENST00000468653 C8orf88P0DMB2 117 aa14.83□□□□□ -0.03
SMC4-209ENST00000468653 Q6ZS46 218 aa14.83□□□□□ -0.03
SMC4-209ENST00000468653 TXN2Q99757 166 aa14.83□□□□□ -0.03
SMC4-209ENST00000468653 PRDM13Q9H4Q3 707 aa14.83□□□□□ -0.03
SMC4-209ENST00000468653 YAE1D1Q9NRH1 226 aa14.83□□□□□ -0.03
SMC4-209ENST00000468653 HOXA3O43365 443 aaPredicted RBP14.83□□□□□ -0.04
SMC4-209ENST00000468653 OR7C2O60412 319 aa14.83□□□□□ -0.04
SMC4-209ENST00000468653 LYZP61626 148 aa14.83□□□□□ -0.04
SMC4-209ENST00000468653 SOHLH1Q5JUK2 328 aa14.83□□□□□ -0.04
SMC4-209ENST00000468653 SVBPQ8N300 66 aa14.83□□□□□ -0.04
SMC4-209ENST00000468653 NOL4LQ96MY1 436 aaPredicted RBP14.83□□□□□ -0.04
SMC4-209ENST00000468653 UHRF2Q96PU4 802 aa14.83□□□□□ -0.04
SMC4-209ENST00000468653 F8W735 103 aaPredicted RBP14.82□□□□□ -0.04
SMC4-209ENST00000468653 TOMM40O96008 361 aa14.82□□□□□ -0.04
SMC4-209ENST00000468653 PLP1P60201 277 aa14.82□□□□□ -0.04
SMC4-209ENST00000468653 UBE2G2P60604 165 aa14.82□□□□□ -0.04
SMC4-209ENST00000468653 MEF2BQ02080 365 aaPredicted RBP14.82□□□□□ -0.04
SMC4-209ENST00000468653 KRTAP1-1Q07627 177 aa14.82□□□□□ -0.04
SMC4-209ENST00000468653 GUCA2BQ16661 112 aa14.82□□□□□ -0.04
SMC4-209ENST00000468653 PQLC2Q6ZP29 291 aa14.82□□□□□ -0.04
SMC4-209ENST00000468653 LINC00305Q7Z4B0 112 aa14.82□□□□□ -0.04
SMC4-209ENST00000468653 FLNAP21333 2647 aaKnown RBP14.82□□□□□ -0.04
SMC4-209ENST00000468653 OR2T8A6NH00 312 aa14.81□□□□□ -0.04
SMC4-209ENST00000468653 YPEL3P61236 119 aaPredicted RBP14.81□□□□□ -0.04
SMC4-209ENST00000468653 MORN5Q5VZ52 161 aa14.81□□□□□ -0.04
SMC4-209ENST00000468653 CYB561D1Q8N8Q1 229 aa14.81□□□□□ -0.04
SMC4-209ENST00000468653 OR51G1Q8NGK1 321 aa14.81□□□□□ -0.04
SMC4-209ENST00000468653 TRAV5A0A0B4J249 113 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 FCGR2BP31994 310 aaPredicted RBP14.8□□□□□ -0.04
SMC4-209ENST00000468653 CST9LP1Q5W188 147 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 SIGLECL1Q8N7X8 197 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 ZNF502Q8TBZ5 544 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 EEF1AKMT3Q96AZ1 226 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 TMEM167BQ9NRX6 74 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 HIGD1AQ9Y241 93 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 SCO1O75880 301 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 TRGV3P03979 118 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 CD81P60033 236 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 ATP5G2Q06055 141 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 OR5AU1Q8NGC0 362 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 OR4F5Q8NH21 305 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 Q8WTZ3 238 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 OR4F4Q96R69 305 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 SLC25A2Q9BXI2 301 aa14.8□□□□□ -0.04
SMC4-209ENST00000468653 GAR1Q9NY12 217 aaKnown RBP14.8□□□□□ -0.04
SMC4-209ENST00000468653 FAM223BA6NKX1 122 aa14.79□□□□□ -0.04
SMC4-209ENST00000468653 C11orf94C9JXX5 98 aa14.79□□□□□ -0.04
SMC4-209ENST00000468653 NUPL2O15504 423 aaKnown RBP14.79□□□□□ -0.04
SMC4-209ENST00000468653 PPIFP30405 207 aaKnown RBP14.79□□□□□ -0.04
SMC4-209ENST00000468653 FAM223AQ8IWN6 122 aa14.79□□□□□ -0.04
SMC4-209ENST00000468653 FAM167A-AS1Q96KT0 104 aa14.79□□□□□ -0.04
SMC4-209ENST00000468653 TRBV7-1A0A0A6YYK4 115 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 H3BUA1 57 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 HNF1AP20823 631 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 ZNF503Q96F45 646 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 TLN2Q9Y4G6 2542 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 SNAPINO95295 136 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 IL4P05112 153 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 CLEC3BP05452 202 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 CTSGP08311 255 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 OR10J4P0C629 311 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 GPR183P32249 361 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 TPPP2P59282 170 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 KIAA0141Q14154 515 aaPredicted RBP14.78□□□□□ -0.04
SMC4-209ENST00000468653 PRSS22Q9GZN4 317 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 NPFFR1Q9GZQ6 430 aa14.78□□□□□ -0.04
SMC4-209ENST00000468653 UBE2L3P68036 154 aaKnown RBP14.77□□□□□ -0.05
SMC4-209ENST00000468653 ATRAIDQ6UW56 229 aa14.77□□□□□ -0.05
SMC4-209ENST00000468653 CLEC19AQ6UXS0 136 aa14.77□□□□□ -0.05
SMC4-209ENST00000468653 ZNF491Q8N8L2 437 aa14.77□□□□□ -0.05
SMC4-209ENST00000468653 RNF125Q96EQ8 232 aa14.77□□□□□ -0.05
SMC4-209ENST00000468653 PAXXQ9BUH6 204 aa14.77□□□□□ -0.05
SMC4-209ENST00000468653 OR51M1Q9H341 326 aa14.77□□□□□ -0.05
SMC4-209ENST00000468653 ZNF580Q9UK33 172 aa14.77□□□□□ -0.05
SMC4-209ENST00000468653 WI2-2373I1.2A0A1W2PRP0 233 aa14.76□□□□□ -0.05
SMC4-209ENST00000468653 BRI3O95415 125 aa14.76□□□□□ -0.05
SMC4-209ENST00000468653 PF4V1P10720 104 aa14.76□□□□□ -0.05
SMC4-209ENST00000468653 ATP5G3P48201 142 aa14.76□□□□□ -0.05
SMC4-209ENST00000468653 TMEM95Q3KNT9 176 aa14.76□□□□□ -0.05
SMC4-209ENST00000468653 STXBP6Q8NFX7 210 aa14.76□□□□□ -0.05
SMC4-209ENST00000468653 TXNDC17Q9BRA2 123 aa14.76□□□□□ -0.05
SMC4-209ENST00000468653 CHRDL1Q9BU40 450 aa14.76□□□□□ -0.05
SMC4-209ENST00000468653 NKX6-2Q9C056 277 aaPredicted RBP14.76□□□□□ -0.05
SMC4-209ENST00000468653 MRPL27Q9P0M9 148 aaKnown RBP14.76□□□□□ -0.05
SMC4-209ENST00000468653 YTHDF2Q9Y5A9 579 aaKnown RBP14.76□□□□□ -0.05
SMC4-209ENST00000468653 TMEM250H0YL14 139 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 NDUFS6O75380 124 aaKnown RBP14.75□□□□□ -0.05
SMC4-209ENST00000468653 OR2C1O95371 312 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 CCDC140Q96MF4 163 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 DUX5Q96PT3 197 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 SLC25A39Q9BZJ4 359 aaPredicted RBP14.75□□□□□ -0.05
SMC4-209ENST00000468653 GNB4Q9HAV0 340 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 PUS1Q9Y606 427 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMC4-209ENST00000468653 FAM74A7A6NL05 159 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 PDE6DO43924 150 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 PYYP10082 97 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 ADMP35318 185 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 FAM90A2PQ658T7 463 aa14.75□□□□□ -0.05
SMC4-209ENST00000468653 S100A7AQ86SG5 101 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms