RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 ZNF471Q9BX82 626 aaPredicted RBP5.53□□□□□ -1.52
NXF3-204ENST00000468528 NPCDR1Q9BY65 106 aa5.53□□□□□ -1.52
NXF3-204ENST00000468528 KRTAP3-3Q9BYR6 98 aa5.53□□□□□ -1.52
NXF3-204ENST00000468528 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
NXF3-204ENST00000468528 SMIM3Q9BZL3 60 aa5.53□□□□□ -1.52
NXF3-204ENST00000468528 GNB4Q9HAV0 340 aa5.53□□□□□ -1.52
NXF3-204ENST00000468528 SLC45A2Q9UMX9 530 aa5.53□□□□□ -1.52
NXF3-204ENST00000468528 IGKV1OR2-108A0A075B7D4 117 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 ELOA3CA0A087WX78 387 aaPredicted RBP5.52□□□□□ -1.53
NXF3-204ENST00000468528 IGHV3-21A0A0B4J1V1 117 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 UMAD1C9J7I0 102 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 K7EMT4 169 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 CCL24O00175 119 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 BMPR1BO00238 502 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 OR2C1O95371 312 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 TSPAN15O95858 294 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 IGHV3-48P01763 117 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 SEC11BP0C7V7 166 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 PSG1P11464 419 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 ADMP35318 185 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 MYCNOSP40205 109 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 PLP1P60201 277 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 FHL3Q13643 280 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 OPCMLQ14982 345 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 RPL7L1Q6DKI1 246 aaKnown RBP5.52□□□□□ -1.53
NXF3-204ENST00000468528 LAMTOR1Q6IAA8 161 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 BAP18Q8IXM2 172 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 OR11H1Q8NG94 326 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 OR1L4Q8NGR5 311 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 OR1N2Q8NGR9 330 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 OR2G3Q8NGZ4 309 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 MARC2Q969Z3 335 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 NARS2Q96I59 477 aaKnown RBP5.52□□□□□ -1.53
NXF3-204ENST00000468528 RNF2Q99496 336 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 MGST2Q99735 147 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 CHRDL1Q9BU40 450 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 ARV1Q9H2C2 271 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 CYTL1Q9NRR1 136 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 MRPL36Q9P0J6 103 aaKnown RBP5.52□□□□□ -1.53
NXF3-204ENST00000468528 UFC1Q9Y3C8 167 aa5.52□□□□□ -1.53
NXF3-204ENST00000468528 IGKV1D-37A0A075B6S9 117 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 ANKRD34BA5PLL1 514 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 A8MWP6 167 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 BOLA2-SMG1P6H3BVE0 249 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 M0QZ24 198 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 GHRHP01286 108 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 CD5P06127 495 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 HOXD3P31249 432 aaPredicted RBP5.51□□□□□ -1.53
NXF3-204ENST00000468528 RAB5CP51148 216 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 PRR20EP86478 221 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 PRR20CP86479 221 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 PRR20DP86480 221 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 PRR20BP86481 221 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 PRR20AP86496 221 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 ZNF90Q03938 601 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 KLF5Q13887 457 aaPredicted RBP5.51□□□□□ -1.53
NXF3-204ENST00000468528 TIGITQ495A1 244 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 C1QL4Q86Z23 238 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 STPG3Q8N7X2 389 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 C11orf44Q8N8P7 122 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 HSD17B11Q8NBQ5 300 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 GATAD1Q8WUU5 269 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 OR5B12Q96R08 314 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 GGTLC1Q9BX51 225 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 TMEM231Q9H6L2 316 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 WFDC1Q9HC57 220 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 DAZ1Q9NQZ3 744 aaKnown RBP5.51□□□□□ -1.53
NXF3-204ENST00000468528 SLC39A9Q9NUM3 307 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 PEMTQ9UBM1 199 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 PUS1Q9Y606 427 aaKnown RBP eCLIP5.51□□□□□ -1.53
NXF3-204ENST00000468528 PXMP4Q9Y6I8 212 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 S4R3C0 116 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 CUBNO60494 3623 aa5.51□□□□□ -1.53
NXF3-204ENST00000468528 IGHV4OR15-8A0A075B7B6 117 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 A0A087WW49 117 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 WI2-2373I1.2A0A1W2PRP0 233 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 A0A1W2PS18 150 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 ADARB2-AS1A8MUL3 147 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 PPP5D1E7EU14 171 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 HYPMO75409 117 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 YIF1AO95070 293 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 IGHV3-23P01764 117 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 IL4P05112 153 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 LINC00869P0C866 280 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 SPP1P10451 314 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 M6PRP20645 277 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 ATP6V0CP27449 155 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 KRTAP10-3P60369 221 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 B2MP61769 119 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 DEFA5Q01523 94 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 TNP2Q05952 138 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 ACOT6Q3I5F7 207 aaPredicted RBP5.5□□□□□ -1.53
NXF3-204ENST00000468528 TOMM20LQ6UXN7 152 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 DPPA3Q6W0C5 159 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 C8orf86Q6ZUL3 223 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 TMEM190Q8WZ59 177 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 ST8SIA2Q92186 375 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 RNF125Q96EQ8 232 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 GRAMD2BQ96HH9 432 aa5.5□□□□□ -1.53
NXF3-204ENST00000468528 RAX2Q96IS3 184 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms