RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MS4A6AQ9H2W1 248 aa14.1□□□□□ -0.15
COL7A1-207ENST00000467985 NXPH3O95157 252 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 NPY1RP25929 384 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 TIGITQ495A1 244 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 PRSS54Q6PEW0 395 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 GSG1LQ6UXU4 331 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 LILRB2Q8N423 598 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 GRAMD2BQ96HH9 432 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 CSTL1Q9H114 145 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 MED28Q9H204 178 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 HSPB7Q9UBY9 170 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 U3KQ87 197 aa14.09□□□□□ -0.15
COL7A1-207ENST00000467985 IGHV3-66A0A0C4DH42 116 aa14.08□□□□□ -0.16
COL7A1-207ENST00000467985 OR10J1P30954 320 aa14.08□□□□□ -0.16
COL7A1-207ENST00000467985 RND2P52198 227 aa14.08□□□□□ -0.16
COL7A1-207ENST00000467985 ATP5IP56385 69 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-207ENST00000467985 YPEL3P61236 119 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-207ENST00000467985 IAH1Q2TAA2 248 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-207ENST00000467985 Q8WTZ3 238 aa14.08□□□□□ -0.16
COL7A1-207ENST00000467985 GSKIPQ9P0R6 139 aa14.08□□□□□ -0.16
COL7A1-207ENST00000467985 MGAT4CQ9UBM8 478 aa14.08□□□□□ -0.16
COL7A1-207ENST00000467985 DNAH1Q9P2D7 4330 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 MPTX1A8MV57 137 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 IFNA10P01566 189 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 IGLC1P0CG04 106 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 SLC25A6P12236 298 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 ATF4P18848 351 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-207ENST00000467985 EIF2B2P49770 351 aaKnown RBP14.07□□□□□ -0.16
COL7A1-207ENST00000467985 TMEM217Q8N7C4 229 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 DTD1Q8TEA8 209 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 GATAD1Q8WUU5 269 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 RABAC1Q9UI14 185 aa14.07□□□□□ -0.16
COL7A1-207ENST00000467985 A0A0J9YWU9 116 aa14.06□□□□□ -0.16
COL7A1-207ENST00000467985 SCGB1D2O95969 90 aa14.06□□□□□ -0.16
COL7A1-207ENST00000467985 P2RY1P47900 373 aa14.06□□□□□ -0.16
COL7A1-207ENST00000467985 ZNF124Q15973 351 aa14.06□□□□□ -0.16
COL7A1-207ENST00000467985 TMEM170AQ8WVE7 144 aa14.06□□□□□ -0.16
COL7A1-207ENST00000467985 WRBO00258 174 aa14.05□□□□□ -0.16
COL7A1-207ENST00000467985 RBKSQ9H477 322 aa14.05□□□□□ -0.16
COL7A1-207ENST00000467985 PLECQ15149 4684 aaKnown RBP14.05□□□□□ -0.16
COL7A1-207ENST00000467985 HELTA6NFD8 242 aa14.04□□□□□ -0.16
COL7A1-207ENST00000467985 MED6O75586 246 aa14.04□□□□□ -0.16
COL7A1-207ENST00000467985 AP2S1P53680 142 aaPredicted RBP14.04□□□□□ -0.16
COL7A1-207ENST00000467985 DEFB131AP59861 70 aa14.04□□□□□ -0.16
COL7A1-207ENST00000467985 ZBTB8BQ8NAP8 495 aaPredicted RBP14.04□□□□□ -0.16
COL7A1-207ENST00000467985 STXBP6Q8NFX7 210 aa14.04□□□□□ -0.16
COL7A1-207ENST00000467985 NPIPB3Q92617 1050 aa14.04□□□□□ -0.16
COL7A1-207ENST00000467985 ACY3Q96HD9 319 aa14.04□□□□□ -0.16
COL7A1-207ENST00000467985 C2orf50Q96LR7 162 aa14.04□□□□□ -0.16
COL7A1-207ENST00000467985 CXorf65A6NEN9 183 aa14.03□□□□□ -0.16
COL7A1-207ENST00000467985 K7EQG2 157 aa14.03□□□□□ -0.16
COL7A1-207ENST00000467985 SIX6O95475 246 aa14.03□□□□□ -0.16
COL7A1-207ENST00000467985 HNRNPCP07910 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL7A1-207ENST00000467985 RD3LP0DJH9 198 aa14.03□□□□□ -0.16
COL7A1-207ENST00000467985 NKX2-1P43699 371 aaPredicted RBP14.03□□□□□ -0.16
COL7A1-207ENST00000467985 RRAS2P62070 204 aaPredicted RBP14.03□□□□□ -0.16
COL7A1-207ENST00000467985 U3KQE9 123 aa14.03□□□□□ -0.16
COL7A1-207ENST00000467985 hCG_2014768A0A024R1R8 64 aa14.02□□□□□ -0.17
COL7A1-207ENST00000467985 NUPR2A6NF83 97 aa14.02□□□□□ -0.17
COL7A1-207ENST00000467985 FAM90A26D6RGX4 464 aa14.02□□□□□ -0.17
COL7A1-207ENST00000467985 TOMM40O96008 361 aa14.02□□□□□ -0.17
COL7A1-207ENST00000467985 IFNA4P05014 189 aa14.02□□□□□ -0.17
COL7A1-207ENST00000467985 IL4P05112 153 aa14.02□□□□□ -0.17
COL7A1-207ENST00000467985 GPX4P36969 197 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-207ENST00000467985 CYCSP99999 105 aaKnown RBP14.02□□□□□ -0.17
COL7A1-207ENST00000467985 PITX3O75364 302 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 CA1P00915 261 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-207ENST00000467985 NUP62P37198 522 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-207ENST00000467985 S100A10P60903 97 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 FCN2Q15485 313 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 LEMD1Q68G75 181 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 C16orf54Q6UWD8 224 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 Q6ZNX1 250 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 STHQ8IWL8 128 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 FAM24BQ8N5W8 94 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 OR4D5Q8NGN0 318 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 RARRES2Q99969 163 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 MAGT1Q9H0U3 335 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 PFDN2Q9UHV9 154 aa14.01□□□□□ -0.17
COL7A1-207ENST00000467985 PMS2P11Q13670 270 aa14□□□□□ -0.17
COL7A1-207ENST00000467985 TMEM41BQ5BJD5 291 aa14□□□□□ -0.17
COL7A1-207ENST00000467985 DCANP1Q8TF63 244 aa14□□□□□ -0.17
COL7A1-207ENST00000467985 SLC35E1Q96K37 410 aa14□□□□□ -0.17
COL7A1-207ENST00000467985 LSM5Q9Y4Y9 91 aaKnown RBP14□□□□□ -0.17
COL7A1-207ENST00000467985 SYNGR2O43760 224 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 SSSCA1O60232 199 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 FABP1P07148 127 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 IAPPP10997 89 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 RAB11AP62491 216 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 EWSR1Q01844 656 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL7A1-207ENST00000467985 USF2Q15853 346 aaPredicted RBP13.99□□□□□ -0.17
COL7A1-207ENST00000467985 OR51G1Q8NGK1 321 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 OR11H2Q8NH07 326 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 GLMPQ8WWB7 406 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 CIB3Q96Q77 187 aaPredicted RBP13.99□□□□□ -0.17
COL7A1-207ENST00000467985 NMES1Q9C002 83 aa13.99□□□□□ -0.17
COL7A1-207ENST00000467985 L7N2F9 121 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 ZNF688P0C7X2 276 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 PSG1P11464 419 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 PVALBP20472 110 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms