RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 HIST1H1DP16402 221 aaKnown RBP2.37□□□□□ -2.03
VPS50-209ENST00000467326 CRYGSP22914 178 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 PSMB8P28062 276 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 DYNLT3P51808 116 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 HBBP68871 147 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 RHOGP84095 191 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 C10orf91Q5T1B1 145 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 Q5XG85 94 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 C22orf39Q6P5X5 142 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 ZNF880Q6PDB4 577 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 TMEM14EPQ6UXP3 125 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 MIR17HGQ75NE6 70 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 LYZL2Q7Z4W2 148 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 SPATA12Q7Z6I5 190 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 C9orf62Q8N4C0 152 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 Q8N9L7 120 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.37□□□□□ -2.03
VPS50-209ENST00000467326 OR5D16Q8NGK9 328 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 OR10AC1Q8NH08 325 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 RNASE6Q93091 150 aaKnown RBP2.37□□□□□ -2.03
VPS50-209ENST00000467326 SCGB3A1Q96QR1 104 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 HIST1H2BLQ99880 126 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 BANF2Q9H503 90 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 MED9Q9NWA0 146 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 GRIN2AQ12879 1464 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 RAPGEF2Q9Y4G8 1499 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 DSPPQ9NZW4 1301 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 PTPRTO14522 1441 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 ZNF670-ZNF695F2Z2N8 137 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 IGHV1-69P01742 117 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 IGHV3-7P01780 117 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 ZNF728P0DKX0 622 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 LINC00694P0DN24 101 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 HLA-EP13747 358 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 MPV17P39210 176 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 NCMAPQ5T1S8 102 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 Q6P435 159 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 ZNF322Q6U7Q0 402 aaPredicted RBP2.36□□□□□ -2.03
VPS50-209ENST00000467326 GLIPR1L1Q6UWM5 242 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 ZNF705AQ6ZN79 300 aaPredicted RBP2.36□□□□□ -2.03
VPS50-209ENST00000467326 BPIFA4PQ86YQ2 179 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 C3orf22Q8N5N4 141 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 MIR7-3HGQ8N6C7 128 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 STAG3L4Q8TBR4 150 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 DCANP1Q8TF63 244 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 LCN9Q8WX39 176 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 DEDD2Q8WXF8 326 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 ZNF714Q96N38 554 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 MCEEQ96PE7 176 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 MRPL32Q9BYC8 188 aaKnown RBP2.36□□□□□ -2.03
VPS50-209ENST00000467326 C11orf1Q9H5F2 150 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 LHX9Q9NQ69 397 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 ZNF835Q9Y2P0 537 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 LINC00588Q9Y4M8 146 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 MAGI1Q96QZ7 1491 aaPredicted RBP2.36□□□□□ -2.03
VPS50-209ENST00000467326 MYH2Q9UKX2 1941 aa2.36□□□□□ -2.03
VPS50-209ENST00000467326 KTN1Q86UP2 1357 aaKnown RBP2.36□□□□□ -2.03
VPS50-209ENST00000467326 KDM6AO15550 1401 aaPredicted RBP2.35□□□□□ -2.03
VPS50-209ENST00000467326 DOCK5Q9H7D0 1870 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 BCL9LQ86UU0 1499 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.35□□□□□ -2.03
VPS50-209ENST00000467326 A0A0D9SEW6 157 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 TRBV27A0A0K0K1C4 114 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 C17orf51A8MQB3 221 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 A8MWP4 228 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 H3BQF6 201 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 LY6LH3BQJ8 138 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 CDC42EP2O14613 210 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 TCL1BO95988 128 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 IGKV1D-33P01593 117 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 IGKV1-33P01594 117 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 CXCL1P09341 107 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 ZNF286BP0CG31 522 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 CGB3P0DN86 165 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 CGB7P0DN87 165 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 HLA-DMBP28068 263 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 ETV6P41212 452 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 ZNF141Q15928 474 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 ZNF181Q2M3W8 571 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 LDLRAD2Q5SZI1 272 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 PHF5AQ7RTV0 110 aaKnown RBP2.35□□□□□ -2.03
VPS50-209ENST00000467326 ZNF101Q8IZC7 436 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 TEX29Q8N6K0 151 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 CNEP1R1Q8N9A8 125 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 ZFP62Q8NB50 900 aaPredicted RBP2.35□□□□□ -2.03
VPS50-209ENST00000467326 BPIFB6Q8NFQ5 453 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 COPS9Q8WXC6 57 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 PP6455Q8WZ26 134 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 RBMXL1Q96E39 390 aaKnown RBP2.35□□□□□ -2.03
VPS50-209ENST00000467326 PRELID3AQ96N28 172 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 MRPL57Q9BQC6 102 aaKnown RBP2.35□□□□□ -2.03
VPS50-209ENST00000467326 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 NPCDR1Q9BY65 106 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 PLA2G2FQ9BZM2 168 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 EPDR1Q9UM22 224 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 RNF11Q9Y3C5 154 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 ICOSQ9Y6W8 199 aa2.35□□□□□ -2.03
VPS50-209ENST00000467326 YLPM1P49750 1951 aaKnown RBP2.35□□□□□ -2.03
VPS50-209ENST00000467326 MEGF6O75095 1541 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms