RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 TMEM70Q9BUB7 260 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 BIN3Q9NQY0 253 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 ACER3Q9NUN7 267 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 SLC35A3Q9Y2D2 325 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 MED1Q15648 1581 aaPredicted RBP1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 TRGV10A0A0A0MS01 117 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 TRAV1-1A0A0B4J248 108 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 TRBV6-5A0A0K0K1A5 114 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 RIIAD1A6NNX1 92 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 MGST1P10620 155 aaKnown RBP1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 BRMS1LQ5PSV4 323 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 PHF13Q86YI8 300 aaPredicted RBP1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 OR2T10Q8NGZ9 312 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 OR10J5Q8NHC4 309 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 ZHX1-C8orf76Q96EF9 292 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 LYSMD1Q96S90 227 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 GPER1Q99527 375 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 PRADC1Q9BSG0 188 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 PBOV1Q9GZY1 135 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 TRABDQ9H4I3 376 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 PCTPQ9UKL6 214 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 SETD5Q9C0A6 1442 aa1.46□□□□□ -2.18
PRPF40A-205ENST00000467114 TRAV14DV4A0A0A6YYC5 116 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 TRAV3A0A0B4J244 114 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 M0R378 163 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 OR2T1O43869 369 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 UBL3O95164 117 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 PRB1P04280 392 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 ASAH2BP0C7U1 165 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 BAALC-AS2P0C853 105 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 IDO1P14902 403 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 NFYBP25208 207 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 SERPINB1P30740 379 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 DYNLT1P63172 113 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 RNASE10Q5GAN6 216 aaKnown RBP1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 C22orf39Q6P5X5 142 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 GRINAQ7Z429 371 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 PDZD9Q8IXQ8 264 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 MALSU1Q96EH3 234 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 TMEM126AQ9H061 195 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 PCBD2Q9H0N5 130 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 BCL2L10Q9HD36 194 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 CCDC88CQ9P219 2028 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 ROCK1Q13464 1354 aa1.45□□□□□ -2.18
PRPF40A-205ENST00000467114 FREM1Q5H8C1 2179 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 GLI3P10071 1580 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 PPP5D1E7EU14 171 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 PGRMC1O00264 195 aaKnown RBP1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 APOA2P02652 100 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 MIFP14174 115 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 UBE2BP63146 152 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 ESRGQ1W209 222 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 LINC00311Q8N616 119 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 C3orf56Q8N813 242 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 SLC30A7Q8NEW0 376 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 ZNF563Q8TA94 476 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 CANT1Q8WVQ1 401 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 MRPL32Q9BYC8 188 aaKnown RBP1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 OR2J1Q9GZK6 312 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 OR5AC2Q9NZP5 309 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 ATPIF1Q9UII2 106 aa1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 BAZ2BQ9UIF8 2168 aaKnown RBP1.44□□□□□ -2.18
PRPF40A-205ENST00000467114 RP1P56715 2156 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 TMEM256-PLSCR3K7ERE1 68 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 NDUFB3O43676 98 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 GGCTO75223 188 aaKnown RBP1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 PROSCO94903 275 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 GLRXP35754 106 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 SSR2P43308 183 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 B2MP61769 119 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 SOSTDC1Q6X4U4 206 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 FAM24BQ8N5W8 94 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 NAA38Q9BRA0 125 aaKnown RBP1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 C6orf62Q9GZU0 229 aaPredicted RBP1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 HS3ST2Q9Y278 367 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 PCDH15Q96QU1 1955 aa1.43□□□□□ -2.18
PRPF40A-205ENST00000467114 GADD45GO95257 159 aa1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 OGNP20774 298 aaKnown RBP1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 EIF5AL1Q6IS14 154 aaKnown RBP1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 NUP35Q8NFH5 326 aa1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 TEX37Q96LM6 180 aa1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 SLC25A21Q9BQT8 299 aaPredicted RBP1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 ADAT1Q9BUB4 502 aaKnown RBP1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 NPCDR1Q9BY65 106 aa1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 CENPHQ9H3R5 247 aa1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 MICAL3Q7RTP6 2002 aa1.42□□□□□ -2.18
PRPF40A-205ENST00000467114 C2orf70A6NJV1 201 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 GPR31O00270 319 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 OR1I1O60431 355 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 TIMM17BO60830 172 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 PIAS1O75925 651 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 IFNA14P01570 189 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 CSN2P05814 226 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 BRS3P32247 399 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 INSL3P51460 131 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 DYNLT3P51808 116 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 RHOGP84095 191 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 MYL5Q02045 173 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 DCUN1D2Q6PH85 259 aa1.41□□□□□ -2.18
PRPF40A-205ENST00000467114 IFT20Q8IY31 132 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms