RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 IGHV3-35A0A0C4DH35 117 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 WI2-2373I1.2A0A1W2PRP0 233 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 TAAR5O14804 337 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 CD33P20138 364 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 ZNF90Q03938 601 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 BTNL8Q6UX41 500 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 KCNRGQ8N5I3 272 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 MARC2Q969Z3 335 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 RCC1LQ96I51 464 aaKnown RBP11.58□□□□□ -0.56
NPHP4-205ENST00000466897 MGST2Q99735 147 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 WDR61Q9GZS3 305 aaKnown RBP11.58□□□□□ -0.56
NPHP4-205ENST00000466897 TRRAPQ9Y4A5 3859 aa11.58□□□□□ -0.56
NPHP4-205ENST00000466897 A0A0D9SG52 128 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 ZNF320A2RRD8 509 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 TMEM213A2RRL7 107 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 AGPAT2O15120 278 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 C8orf88P0DMB2 117 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-205ENST00000466897 PLP1P60201 277 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 PXDC1Q5TGL8 231 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 IL34Q6ZMJ4 242 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 BPIFCQ8NFQ6 507 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 RNF125Q96EQ8 232 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 ELOVL1Q9BW60 279 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 GGTLC1Q9BX51 225 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 NPCDR1Q9BY65 106 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 SLC45A2Q9UMX9 530 aa11.57□□□□□ -0.56
NPHP4-205ENST00000466897 C2orf70A6NJV1 201 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 WIPF1O43516 503 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 YIF1AO95070 293 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 IFNA5P01569 189 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 IL4P05112 153 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 FGF7P21781 194 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 RPL29P47914 159 aaKnown RBP11.56□□□□□ -0.56
NPHP4-205ENST00000466897 CAMLGP49069 296 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 INSL3P51460 131 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 CD300CQ08708 224 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 OPCMLQ14982 345 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 GPR61Q9BZJ8 451 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 SMIM3Q9BZL3 60 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 WFDC1Q9HC57 220 aa11.56□□□□□ -0.56
NPHP4-205ENST00000466897 MRPL27Q9P0M9 148 aaKnown RBP11.56□□□□□ -0.56
NPHP4-205ENST00000466897 CSN3P07498 182 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 CRYBB3P26998 211 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 PRR20EP86478 221 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 PRR20CP86479 221 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 PRR20DP86480 221 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 PRR20BP86481 221 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 PRR20AP86496 221 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 ZFP69Q49AA0 526 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 C20orf24Q9BUV8 137 aa11.55□□□□□ -0.56
NPHP4-205ENST00000466897 SEC14L6B5MCN3 397 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 C17orf112F2Z3M2 114 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 LINC00869P0C866 280 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 CXCL2P19875 107 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 CBLN1P23435 193 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 S100A7P31151 101 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 BMI1P35226 326 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 USF2Q15853 346 aaPredicted RBP11.54□□□□□ -0.56
NPHP4-205ENST00000466897 TM4SF20Q53R12 229 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 C9orf66Q5T8R8 295 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 TMEM182Q6ZP80 229 aaPredicted RBP11.54□□□□□ -0.56
NPHP4-205ENST00000466897 SCGB1C1Q8TD33 95 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 METTL26Q96S19 204 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 TIMM9Q9Y5J7 89 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 U3KQE9 123 aa11.54□□□□□ -0.56
NPHP4-205ENST00000466897 PKD1L1Q8TDX9 2849 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 BORCS7-ASMTA0A0B4J1R7 106 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 IGHV7-4-1A0A0J9YVY3 117 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 JTBO76095 146 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 HNRNPCP07910 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPHP4-205ENST00000466897 FOLR2P14207 255 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 NPPCP23582 126 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 EIF2B2P49770 351 aaKnown RBP11.53□□□□□ -0.56
NPHP4-205ENST00000466897 ADAMTSL5Q6ZMM2 481 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 S100A7AQ86SG5 101 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 STPG3Q8N7X2 389 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 ZNF709Q8N972 641 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 ARPC5LQ9BPX5 153 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 TECRQ9NZ01 308 aaKnown RBP11.53□□□□□ -0.56
NPHP4-205ENST00000466897 SMPXQ9UHP9 88 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 PFDN2Q9UHV9 154 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 RABAC1Q9UI14 185 aa11.53□□□□□ -0.56
NPHP4-205ENST00000466897 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 ELOA3CA0A087WX78 387 aaPredicted RBP11.52□□□□□ -0.57
NPHP4-205ENST00000466897 A0A1W2PS18 150 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 BCL2L11O43521 198 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 GATA2P23769 480 aaPredicted RBP11.52□□□□□ -0.57
NPHP4-205ENST00000466897 LYZP61626 148 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 B2MP61769 119 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 LGALSLQ3ZCW2 172 aaPredicted RBP11.52□□□□□ -0.57
NPHP4-205ENST00000466897 Q6ZRG5 221 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 OR2K2Q8NGT1 345 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 NARS2Q96I59 477 aaKnown RBP11.52□□□□□ -0.57
NPHP4-205ENST00000466897 PSMG3Q9BT73 122 aaPredicted RBP11.52□□□□□ -0.57
NPHP4-205ENST00000466897 ARL6Q9H0F7 186 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 TMEM231Q9H6L2 316 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 VSIRQ9H7M9 311 aa11.52□□□□□ -0.57
NPHP4-205ENST00000466897 CYTL1Q9NRR1 136 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms