RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PRR20BP86481 221 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 PRR20AP86496 221 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 RELQ04864 619 aaPredicted RBP8.52□□□□□ -1.05
VCP-204ENST00000466100 ZNF266Q14584 549 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 UNQ9165/PRO28630Q6UXU0 137 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 CYP2G1PQ6ZSU1 146 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 REC114Q7Z4M0 266 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 TMEM190Q8WZ59 177 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 RCC1LQ96I51 464 aaKnown RBP8.52□□□□□ -1.05
VCP-204ENST00000466100 ARPC5LQ9BPX5 153 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 ARV1Q9H2C2 271 aa8.52□□□□□ -1.05
VCP-204ENST00000466100 WI2-2373I1.2A0A1W2PRP0 233 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 A8MWP6 167 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 LGALS9O00182 355 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 SCGB2A1O75556 95 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 IFNA5P01569 189 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 RD3LP0DJH9 198 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 PSG1P11464 419 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
VCP-204ENST00000466100 RPL29P47914 159 aaKnown RBP8.51□□□□□ -1.05
VCP-204ENST00000466100 CAMLGP49069 296 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 SELENOTP62341 195 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 RPEL1Q2QD12 228 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 TOMM20LQ6UXN7 152 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 C1QL4Q86Z23 238 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 OR4F17Q8NGA8 305 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 DPF1Q92782 380 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 DLX4Q92988 240 aaPredicted RBP8.51□□□□□ -1.05
VCP-204ENST00000466100 OR4F4Q96R69 305 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 RSG1Q9BU20 258 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 PUS1Q9Y606 427 aaKnown RBP eCLIP8.51□□□□□ -1.05
VCP-204ENST00000466100 RFNGQ9Y644 331 aa8.51□□□□□ -1.05
VCP-204ENST00000466100 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 BORCS7-ASMTA0A0B4J1R7 106 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 KANTRA0A1W2PQU2 76 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 JTBO76095 146 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 FABP1P07148 127 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 SYNJ2BPP57105 145 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 PLP1P60201 277 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 USF2Q15853 346 aaPredicted RBP8.5□□□□□ -1.05
VCP-204ENST00000466100 MIC13Q5XKP0 118 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 STPG3Q8N7X2 389 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 BPIFCQ8NFQ6 507 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 OR51G1Q8NGK1 321 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 SPATA3Q8NHX4 192 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 STOML3Q8TAV4 291 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 GINS3Q9BRX5 216 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 TIMM9Q9Y5J7 89 aa8.5□□□□□ -1.05
VCP-204ENST00000466100 IGHV3OR16-8A0A075B7F1 116 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 TMEM213A2RRL7 107 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 YIF1AO95070 293 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 IL4P05112 153 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 ATP6V0CP27449 155 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 RAB31Q13636 194 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 FAM106AQ4KMX7 169 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 IL34Q6ZMJ4 242 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 HSD17B11Q8NBQ5 300 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 SCGB1C1Q8TD33 95 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 Q8WTZ3 238 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 PPP1R14BQ96C90 147 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 RNF125Q96EQ8 232 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 PSMG3Q9BT73 122 aaPredicted RBP8.49□□□□□ -1.05
VCP-204ENST00000466100 SH3BGRL3Q9H299 93 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 SLC39A9Q9NUM3 307 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 BOLA1Q9Y3E2 137 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 PXMP4Q9Y6I8 212 aa8.49□□□□□ -1.05
VCP-204ENST00000466100 K7EMT4 169 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 M0QZ24 198 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 CFDP00746 253 aaPredicted RBP8.48□□□□□ -1.05
VCP-204ENST00000466100 PF4P02776 101 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 HNRNPCP07910 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
VCP-204ENST00000466100 EDN2P20800 178 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 ELLP55199 621 aaPredicted RBP8.48□□□□□ -1.05
VCP-204ENST00000466100 B2MP61769 119 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 PATE2Q6UY27 113 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 ADAMTSL5Q6ZMM2 481 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 OR2G3Q8NGZ4 309 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 ZNF471Q9BX82 626 aaPredicted RBP8.48□□□□□ -1.05
VCP-204ENST00000466100 KCNIP2Q9NS61 270 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 U3KQE9 123 aa8.48□□□□□ -1.05
VCP-204ENST00000466100 C2orf70A6NJV1 201 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 C17orf112F2Z3M2 114 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 OVOL1O14753 267 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 ZNF207O43670 478 aaKnown RBP8.47□□□□□ -1.05
VCP-204ENST00000466100 C8orf88P0DMB2 117 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 SPP1P10451 314 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 CRYBB3P26998 211 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 LYZP61626 148 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 TM4SF20Q53R12 229 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 PXDC1Q5TGL8 231 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 SLC51BQ86UW2 128 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 ZNF709Q8N972 641 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 OR9G4Q8NGQ1 327 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 TMEM37Q8WXS4 190 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 GNPNAT1Q96EK6 184 aaPredicted RBP8.47□□□□□ -1.05
VCP-204ENST00000466100 C20orf24Q9BUV8 137 aa8.47□□□□□ -1.05
VCP-204ENST00000466100 DAZ1Q9NQZ3 744 aaKnown RBP8.47□□□□□ -1.05
VCP-204ENST00000466100 MRPL27Q9P0M9 148 aaKnown RBP8.47□□□□□ -1.05
VCP-204ENST00000466100 UFC1Q9Y3C8 167 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms