RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 H3BTX0 84 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 CDKN1AP38936 164 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 JOSD1Q15040 202 aaPredicted RBP16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 CFHR4Q92496 578 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 FAM103A1Q9BTL3 118 aaKnown RBP16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 SVEP1Q4LDE5 3571 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 NDUFS7O75251 213 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 CA1P00915 261 aaPredicted RBP16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 GZMBP10144 247 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 TAS2R60P59551 318 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 GBGT1Q8N5D6 347 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 SGK494Q96LW2 274 aa16.2■□□□□ 0.18
TUBGCP3-204ENST00000464139 WNK2Q9Y3S1 2297 aa16.19■□□□□ 0.18
TUBGCP3-204ENST00000464139 I3L2K1 104 aa16.19■□□□□ 0.18
TUBGCP3-204ENST00000464139 SNURFLB1AK76 121 aa16.19■□□□□ 0.18
TUBGCP3-204ENST00000464139 PSG1P11464 419 aa16.19■□□□□ 0.18
TUBGCP3-204ENST00000464139 MYCNOSP40205 109 aa16.19■□□□□ 0.18
TUBGCP3-204ENST00000464139 FAM168AQ92567 244 aa16.19■□□□□ 0.18
TUBGCP3-204ENST00000464139 TMEM18Q96B42 140 aa16.19■□□□□ 0.18
TUBGCP3-204ENST00000464139 NBR2O15453 112 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 IGLC1P0CG04 106 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 HES1Q14469 280 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 BAGE2Q86Y30 109 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 STXBP6Q8NFX7 210 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 RPH3ALQ9UNE2 315 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 PGPA6NDG6 321 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 ZNF705GA8MUZ8 300 aaPredicted RBP16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 M0R1W7 72 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 SLC25A5P05141 298 aaKnown RBP16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 NBEAP1P0C6P0 100 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 PRTN3P24158 256 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 LYZP61626 148 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 PAX2Q02962 417 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 SSX2Q16385 188 aa16.18■□□□□ 0.18
TUBGCP3-204ENST00000464139 CX3CL1P78423 397 aa16.17■□□□□ 0.18
TUBGCP3-204ENST00000464139 ODF3BA8MYP8 253 aa16.17■□□□□ 0.18
TUBGCP3-204ENST00000464139 CEACAM3P40198 252 aa16.17■□□□□ 0.18
TUBGCP3-204ENST00000464139 DNLZQ5SXM8 178 aa16.17■□□□□ 0.18
TUBGCP3-204ENST00000464139 DTX2Q86UW9 622 aa16.17■□□□□ 0.18
TUBGCP3-204ENST00000464139 PRO1933Q9H354 126 aa16.17■□□□□ 0.18
TUBGCP3-204ENST00000464139 EPDR1Q9UM22 224 aa16.17■□□□□ 0.18
TUBGCP3-204ENST00000464139 GP9P14770 177 aa16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 COL12A1Q99715 3063 aa16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 ZFP36P26651 326 aaKnown RBP16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 PLP1P60201 277 aa16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 KLF17Q5JT82 389 aaPredicted RBP16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 PRR27Q6MZM9 219 aa16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 DYNAPQ8N1N2 210 aa16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 OR5R1Q8NH85 324 aa16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 TP53TG3Q9ULZ0 132 aa16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 HIGD1AQ9Y241 93 aa16.16■□□□□ 0.18
TUBGCP3-204ENST00000464139 AKAP6Q13023 2319 aa16.15■□□□□ 0.18
TUBGCP3-204ENST00000464139 GPR6P46095 362 aaPredicted RBP16.15■□□□□ 0.18
TUBGCP3-204ENST00000464139 MRPL54Q6P161 138 aaKnown RBP16.15■□□□□ 0.18
TUBGCP3-204ENST00000464139 VMO1Q7Z5L0 202 aa16.15■□□□□ 0.18
TUBGCP3-204ENST00000464139 RASL11BQ9BPW5 248 aa16.15■□□□□ 0.18
TUBGCP3-204ENST00000464139 PKD1L2Q7Z442 2459 aa16.15■□□□□ 0.18
TUBGCP3-204ENST00000464139 SMIM27A0A1W2PRY6 76 aa16.14■□□□□ 0.18
TUBGCP3-204ENST00000464139 K7EIM0 57 aa16.14■□□□□ 0.18
TUBGCP3-204ENST00000464139 CRISP2P16562 243 aa16.14■□□□□ 0.18
TUBGCP3-204ENST00000464139 S4R3C0 116 aa16.14■□□□□ 0.18
TUBGCP3-204ENST00000464139 IGKV1-17P01599 117 aa16.14■□□□□ 0.17
TUBGCP3-204ENST00000464139 NPBQ8NG41 125 aa16.14■□□□□ 0.17
TUBGCP3-204ENST00000464139 GNB1LQ9BYB4 327 aa16.14■□□□□ 0.17
TUBGCP3-204ENST00000464139 NAT8BQ9UHF3 227 aa16.14■□□□□ 0.17
TUBGCP3-204ENST00000464139 RAB4BP61018 213 aa16.13■□□□□ 0.17
TUBGCP3-204ENST00000464139 UBE2G1P62253 170 aa16.13■□□□□ 0.17
TUBGCP3-204ENST00000464139 ZNF600Q6ZNG1 722 aa16.13■□□□□ 0.17
TUBGCP3-204ENST00000464139 UBTD1Q9HAC8 227 aa16.13■□□□□ 0.17
TUBGCP3-204ENST00000464139 NDUFA3O95167 84 aa16.13■□□□□ 0.17
TUBGCP3-204ENST00000464139 NUDT10Q8NFP7 164 aa16.13■□□□□ 0.17
TUBGCP3-204ENST00000464139 NUDT11Q96G61 164 aa16.13■□□□□ 0.17
TUBGCP3-204ENST00000464139 F2Z2F3 143 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 LINC00310P59036 64 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 TMEM183BQ1AE95 376 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 KIAA1644Q3SXP7 199 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 TMEM136Q6ZRR5 245 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 SRSF8Q9BRL6 282 aaKnown RBP16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 SLC25A39Q9BZJ4 359 aaPredicted RBP16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 Q9H3A6 140 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 CACNA1AO00555 2505 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 UQCRFS1P47985 274 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 C5orf64Q2M2E5 130 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 CMTM2Q8TAZ6 248 aa16.12■□□□□ 0.17
TUBGCP3-204ENST00000464139 TRBV9A0A0B4J1U6 114 aa16.11■□□□□ 0.17
TUBGCP3-204ENST00000464139 GATCO43716 136 aaKnown RBP16.11■□□□□ 0.17
TUBGCP3-204ENST00000464139 FAM209BQ5JX69 171 aa16.11■□□□□ 0.17
TUBGCP3-204ENST00000464139 RBM14Q96PK6 669 aaKnown RBP16.11■□□□□ 0.17
TUBGCP3-204ENST00000464139 NCBP2LA6PVI3 153 aaKnown RBP16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 SERF1AO75920 110 aa16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 PKIAP61925 76 aa16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 HOXB4P17483 251 aaPredicted RBP16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 RPL19P84098 196 aaKnown RBP16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 WDR73Q6P4I2 378 aa16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 FAM231DQ6ZW35 169 aa16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 MBD6Q96DN6 1003 aa16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 C7orf69Q9H7B7 122 aa16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 ZNF586Q9NXT0 402 aa16.1■□□□□ 0.17
TUBGCP3-204ENST00000464139 IZUMO1RA6ND01 250 aa16.09■□□□□ 0.17
TUBGCP3-204ENST00000464139 BAGE3Q86Y29 109 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms