RNA–Protein interactions for RNA: ENST00000463621.3

CLASP1-209, Transcript of cytoplasmic linker associated protein 1, human

TSL 4

Gene CLASP1, Length 536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP1-209	ENST00000463621	PIK3CD-AS1	Q5SR53	167 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	ZNF626	Q68DY1	528 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	SNX29P2	Q8IUI4	249 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR11H6	Q8NGC7	330 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	SPTSSA	Q969W0	71 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	NMNAT3	Q96T66	252 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	RARRES2	Q99969	163 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	TM2D3	Q9BRN9	247 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	SLC25A33	Q9BSK2	321 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	NDFIP1	Q9BT67	221 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	THTPA	Q9BU02	230 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	SNHG12	Q9BXW3	62 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	RNASE7	Q9H1E1	156 aa	Known RBP	4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR2D2	Q9H210	308 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	HES4	Q9HCC6	221 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	MRPL27	Q9P0M9	148 aa	Known RBP	4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621	TNFSF18	Q9UNG2	199 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621		V9GYS6	101 aa		4.2	□□□□□ -1.74
CLASP1-209	ENST00000463621		A0A087WUU8	490 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	TEX50	A0A1B0GTY4	177 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	ZNF850	A8MQ14	1090 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	C17orf98	A8MV24	154 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	SNURFL	B1AK76	121 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621		F6UB75	175 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	FFAR1	O14842	300 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	KBTBD11	O94819	623 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	PGA5	P0DJD9	388 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	SMIM17	P0DL12	118 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	IGHV1-8	P0DP01	117 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	CXCL3	P19876	107 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	BCL3	P20749	454 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	BLVRB	P30043	206 aa	Predicted RBP	4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	NUDT2	P50583	147 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	GPM6A	P51674	278 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	HNRNPA3	P51991	378 aa	Known RBP	4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	APOC4	P55056	127 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	GP2	P55259	537 aa	Known RBP	4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	FXYD6P3	P58550	94 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	RND3	P61587	244 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	RPL24	P83731	157 aa	Known RBP	4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	ZNF85	Q03923	595 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	TMEM187	Q14656	261 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	GUCA2B	Q16661	112 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	MORN2	Q502X0	79 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	LCN8	Q6JVE9	175 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	LYPD4	Q6UWN0	246 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	DEFB107A	Q8IZN7	70 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR8I2	Q8N0Y5	310 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	SLC35G3	Q8N808	338 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR51G1	Q8NGK1	321 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR13C8	Q8NGS7	320 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR2G3	Q8NGZ4	309 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	VN1R17P	Q8TDU5	208 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR51I2	Q9H344	312 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	UQCC1	Q9NVA1	299 aa		4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	RBFOX1	Q9NWB1	397 aa	Known RBP	4.19	□□□□□ -1.74
CLASP1-209	ENST00000463621	TNC	P24821	2201 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	TRAV8-4	A0A0B4J246	113 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	TRAV39	A0A0B4J263	110 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	FAM236D	A0A1B0GTK5	79 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	hADV38S2	A0JD32	116 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	GAGE12J	A6NER3	117 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	LINC01548	A6NM66	108 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	AIP	O00170	330 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	GAGE7	O76087	117 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	NDUFB2	O95178	105 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	LY6G6C	O95867	125 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	NRAS	P01111	189 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621		P01737	135 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	UCHL1	P09936	223 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	GAGE12F	P0CL80	117 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	GAGE12G	P0CL81	117 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	GAGE12I	P0CL82	117 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	ZNF728	P0DKX0	622 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	FAM236C	P0DP71	79 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	FOLR2	P14207	255 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	SPN	P16150	400 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	ZNF823	P16415	610 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	RPL7	P18124	248 aa	Known RBP	4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	CXCL2	P19875	107 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	S100A2	P29034	98 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	G6PC	P35575	357 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	GAGE4	Q13068	117 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	PRDX4	Q13162	271 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	RPP25L	Q8N5L8	163 aa	Known RBP	4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR5A2	Q8NGI9	324 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR4K13	Q8NH42	304 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	OR1L1	Q8NH94	360 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	BLNK	Q8WV28	456 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	ZNRF4	Q8WWF5	429 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	SRSF12	Q8WXF0	261 aa	Known RBP	4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	LINC00476	Q8WZB0	136 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	ERMAP	Q96PL5	475 aa	Predicted RBP	4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	KIR2DL4	Q99706	377 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	RTL8A	Q9BWD3	113 aa		4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	NKX6-2	Q9C056	277 aa	Predicted RBP	4.18	□□□□□ -1.74
CLASP1-209	ENST00000463621	POLR2J2	Q9GZM3	115 aa	Known RBP	4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms