RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 LY6G5BQ8NDX9 201 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 OR4B1Q8NGF8 309 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 OR10X1Q8NGY0 326 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 MRPL20Q9BYC9 149 aaKnown RBP9.97□□□□□ -0.81
COL4A6-204ENST00000461897 SAMD10Q9BYL1 202 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 ZNF586Q9NXT0 402 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 FBXL7Q9UJT9 491 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 ARHGAP32A7KAX9 2087 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 BMPR1BO00238 502 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 CD33P20138 364 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 GPR6P46095 362 aaPredicted RBP9.96□□□□□ -0.81
COL4A6-204ENST00000461897 ZNF137PP52743 207 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 DIAPH2-AS1Q14236 149 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 TDRG1Q3Y452 100 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 OR1L4Q8NGR5 311 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 ST6GALNAC6Q969X2 333 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 HARBI1Q96MB7 349 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 SPOCK3Q9BQ16 436 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 VAMP8Q9BV40 100 aa9.96□□□□□ -0.81
COL4A6-204ENST00000461897 MRPL27Q9P0M9 148 aaKnown RBP9.96□□□□□ -0.81
COL4A6-204ENST00000461897 IGHV2-26A0A0B4J1V2 119 aa9.96□□□□□ -0.82
COL4A6-204ENST00000461897 RBP4P02753 201 aa9.96□□□□□ -0.82
COL4A6-204ENST00000461897 REG1BP48304 166 aa9.96□□□□□ -0.82
COL4A6-204ENST00000461897 PRB3Q04118 309 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-204ENST00000461897 MLANAQ16655 118 aa9.96□□□□□ -0.82
COL4A6-204ENST00000461897 PVRIGQ6DKI7 326 aa9.96□□□□□ -0.82
COL4A6-204ENST00000461897 PDPNQ86YL7 162 aa9.96□□□□□ -0.82
COL4A6-204ENST00000461897 OR10W1Q8NGF6 305 aa9.96□□□□□ -0.82
COL4A6-204ENST00000461897 SSBP3Q9BWW4 388 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-204ENST00000461897 ZNF430Q9H8G1 570 aaPredicted RBP9.96□□□□□ -0.82
COL4A6-204ENST00000461897 A0A1W2PS18 150 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 TCRBV4S1A1TA0A5B7 111 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 CGB1A6NKQ9 187 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 LIPFP07098 398 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 MYCNOSP40205 109 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 CTRLP40313 264 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 UBE2L3P68036 154 aaKnown RBP9.95□□□□□ -0.82
COL4A6-204ENST00000461897 OR4C13Q8NGP0 309 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 TMEM186Q96B77 213 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 SMIM12Q96EX1 92 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 NRN1Q9NPD7 142 aa9.95□□□□□ -0.82
COL4A6-204ENST00000461897 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 ZNF253O75346 499 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-204ENST00000461897 IGLV1-47P01700 117 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 IGHV4-39P01824 125 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 FXYD3Q14802 87 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 MORN5Q5VZ52 161 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 ZNF329Q86UD4 541 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 OR2T6Q8NHC8 308 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 VN1R17PQ8TDU5 208 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 FLYWCH2Q96CP2 140 aaKnown RBP9.94□□□□□ -0.82
COL4A6-204ENST00000461897 ATG101Q9BSB4 218 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 CHRDL1Q9BU40 450 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 ONECUT1Q9UBC0 465 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 TBL2Q9Y4P3 447 aaKnown RBP9.94□□□□□ -0.82
COL4A6-204ENST00000461897 AMMECR1Q9Y4X0 333 aaPredicted RBP9.94□□□□□ -0.82
COL4A6-204ENST00000461897 RNF114Q9Y508 228 aa9.94□□□□□ -0.82
COL4A6-204ENST00000461897 IGLV2-23P01705 113 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 SUB1P53999 127 aaKnown RBP eCLIP9.93□□□□□ -0.82
COL4A6-204ENST00000461897 BPIFB3P59826 476 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 WT1-ASQ06250 92 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 KLF5Q13887 457 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-204ENST00000461897 PATE2Q6UY27 113 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 ZNF705AQ6ZN79 300 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-204ENST00000461897 C19orf35Q6ZS72 473 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 TNFRSF14Q92956 283 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 FXYD5Q96DB9 178 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 GRAMD2BQ96HH9 432 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 PAXXQ9BUH6 204 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 FNDC4Q9H6D8 234 aaPredicted RBP9.93□□□□□ -0.82
COL4A6-204ENST00000461897 C7orf69Q9H7B7 122 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 ZNF355PQ9NSJ1 428 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 LOC105371242A0A075B767 164 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 TRAV5A0A0B4J249 113 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 DIRC3C9JPN6 131 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 E7EUB6 86 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 PEX7O00628 323 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 COX7A2P2O60397 106 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 APCSP02743 223 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
COL4A6-204ENST00000461897 MGST1P10620 155 aaKnown RBP9.93□□□□□ -0.82
COL4A6-204ENST00000461897 SRIP30626 198 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 AMTP48728 403 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 PAX2Q02962 417 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 GAGE1Q13065 139 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 C10orf113Q5VZT2 155 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 NIT1Q86X76 327 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 STXBP6Q8NFX7 210 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 RCHY1Q96PM5 261 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 CCL19Q99731 98 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 CLEC7AQ9BXN2 247 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 BPESC1Q9GZL8 116 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 PAM16Q9Y3D7 125 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 FBN2P35556 2912 aa9.93□□□□□ -0.82
COL4A6-204ENST00000461897 CSMD2Q7Z408 3487 aa9.92□□□□□ -0.82
COL4A6-204ENST00000461897 KMT2BQ9UMN6 2715 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-204ENST00000461897 LRRK2Q5S007 2527 aa9.92□□□□□ -0.82
COL4A6-204ENST00000461897 OR2J3O76001 311 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms