RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR11H2Q8NH07 326 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 GLMPQ8WWB7 406 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 NPIPB3Q92617 1050 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 TRIM63Q969Q1 353 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 C11orf68Q9H3H3 251 aaKnown RBP6.69□□□□□ -1.34
BRCA1-207ENST00000461798 MCUBQ9NWR8 336 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 RABAC1Q9UI14 185 aa6.69□□□□□ -1.34
BRCA1-207ENST00000461798 DUXBA0A1W2PPF3 345 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 BUB3O43684 328 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 TOMM40O96008 361 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 CA1P00915 261 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-207ENST00000461798 RD3LP0DJH9 198 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 SLC25A6P12236 298 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 FAUP35544 74 aaKnown RBP6.68□□□□□ -1.34
BRCA1-207ENST00000461798 AP3S2P59780 193 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 USF2Q15853 346 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-207ENST00000461798 TMEM128Q5BJH2 165 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 MORN3Q6PF18 240 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-207ENST00000461798 STHQ8IWL8 128 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 STXBP6Q8NFX7 210 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 DTD1Q8TEA8 209 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 SLC25A21Q9BQT8 299 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-207ENST00000461798 MFFQ9GZY8 342 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 RBKSQ9H477 322 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 PRR13Q9NZ81 148 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 V9GYH0 126 aa6.68□□□□□ -1.34
BRCA1-207ENST00000461798 FAM229AH3BQW9 127 aa6.67□□□□□ -1.34
BRCA1-207ENST00000461798 IFNA10P01566 189 aa6.67□□□□□ -1.34
BRCA1-207ENST00000461798 IL4P05112 153 aa6.67□□□□□ -1.34
BRCA1-207ENST00000461798 SPP1P10451 314 aa6.67□□□□□ -1.34
BRCA1-207ENST00000461798 PSG1P11464 419 aa6.67□□□□□ -1.34
BRCA1-207ENST00000461798 CCDC190Q86UF4 302 aa6.67□□□□□ -1.34
BRCA1-207ENST00000461798 C11orf45Q8TAV5 145 aa6.67□□□□□ -1.34
BRCA1-207ENST00000461798 PHLDA1Q8WV24 401 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-207ENST00000461798 ACY3Q96HD9 319 aa6.67□□□□□ -1.34
BRCA1-207ENST00000461798 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 ZNF705EA8MWA4 302 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-207ENST00000461798 FAM90A26D6RGX4 464 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 ZNF688P0C7X2 276 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 DHRS2Q13268 280 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 GAMTQ14353 236 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 ZNF79Q15937 498 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 PYDC2Q56P42 97 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 OR8G2PQ6IF36 304 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 TOMM5Q8N4H5 51 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 CSNK1G2-AS1Q8NCQ2 148 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 OR51G1Q8NGK1 321 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 OR1S1Q8NH92 325 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 RAB40CQ96S21 281 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 HRH4Q9H3N8 390 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 PFDN2Q9UHV9 154 aa6.66□□□□□ -1.34
BRCA1-207ENST00000461798 EPPK1P58107 5090 aaKnown RBP6.66□□□□□ -1.34
BRCA1-207ENST00000461798 IGKV1D-37A0A075B6S9 117 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 KNCNA6PVL3 124 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 ZNF701M0R085 212 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-207ENST00000461798 LY6G6CO95867 125 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 IFNA4P05014 189 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 MIFP14174 115 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 S100A5P33763 92 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 NUP62P37198 522 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-207ENST00000461798 TCTAP57738 103 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 NANOS2P60321 138 aaKnown RBP6.65□□□□□ -1.34
BRCA1-207ENST00000461798 LGALS9CQ6DKI2 356 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 SIGLEC15Q6ZMC9 328 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 Q8NAQ8 132 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 RNF125Q96EQ8 232 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 RBM38Q9H0Z9 239 aaKnown RBP6.65□□□□□ -1.34
BRCA1-207ENST00000461798 NRN1Q9NPD7 142 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 TMED3Q9Y3Q3 217 aa6.65□□□□□ -1.34
BRCA1-207ENST00000461798 BIRC6Q9NR09 4857 aa6.65□□□□□ -1.35
BRCA1-207ENST00000461798 ZFP92A6NM28 416 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 SNRPGP15A8MWD9 76 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 MED6O75586 246 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 SFT2D2O95562 160 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 CFDP00746 253 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-207ENST00000461798 FABP1P07148 127 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 RBMY1A1P0DJD3 496 aaKnown RBP6.64□□□□□ -1.35
BRCA1-207ENST00000461798 RBMY1CP0DJD4 496 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 C4BPBP20851 252 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 UBE2MP61081 183 aaKnown RBP6.64□□□□□ -1.35
BRCA1-207ENST00000461798 SNRPD3P62318 126 aaKnown RBP6.64□□□□□ -1.35
BRCA1-207ENST00000461798 RAB11AP62491 216 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 ZNF90Q03938 601 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 RBMY1FQ15415 496 aaKnown RBP6.64□□□□□ -1.35
BRCA1-207ENST00000461798 PSMG4Q5JS54 123 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 ACTL10Q5JWF8 245 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 C1orf194Q5T5A4 169 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 TMED4Q7Z7H5 227 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 THAP8Q8NA92 274 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 SLC35E1Q96K37 410 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 CIB3Q96Q77 187 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-207ENST00000461798 TRGV9Q99603 122 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 X6R8D5 127 aa6.64□□□□□ -1.35
BRCA1-207ENST00000461798 IGHV4-28A0A0C4DH34 117 aa6.63□□□□□ -1.35
BRCA1-207ENST00000461798 C11orf94C9JXX5 98 aa6.63□□□□□ -1.35
BRCA1-207ENST00000461798 PRSS46E5RG02 174 aa6.63□□□□□ -1.35
BRCA1-207ENST00000461798 H3BMM0 161 aa6.63□□□□□ -1.35
BRCA1-207ENST00000461798 DEFB4AO15263 64 aa6.63□□□□□ -1.35
BRCA1-207ENST00000461798 VAMP1P23763 118 aa6.63□□□□□ -1.35
BRCA1-207ENST00000461798 NKX2-1P43699 371 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms