RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 BUB3O43684 328 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 MIFP14174 115 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
COL1A2-202ENST00000461525 PYDC2Q56P42 97 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 SIGLEC15Q6ZMC9 328 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 OR51G1Q8NGK1 321 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 TRIM63Q969Q1 353 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 RNF125Q96EQ8 232 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 SLC35E1Q96K37 410 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 PBDC1Q9BVG4 233 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
COL1A2-202ENST00000461525 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
COL1A2-202ENST00000461525 ZFP92A6NM28 416 aa12.85□□□□□ -0.35
COL1A2-202ENST00000461525 ZNF705EA8MWA4 302 aaPredicted RBP12.85□□□□□ -0.35
COL1A2-202ENST00000461525 TMEM128Q5BJH2 165 aa12.85□□□□□ -0.35
COL1A2-202ENST00000461525 TOMM5Q8N4H5 51 aa12.85□□□□□ -0.35
COL1A2-202ENST00000461525 RPP25LQ8N5L8 163 aaKnown RBP12.85□□□□□ -0.35
COL1A2-202ENST00000461525 C2CD4CQ8TF44 421 aa12.85□□□□□ -0.35
COL1A2-202ENST00000461525 HRH4Q9H3N8 390 aa12.85□□□□□ -0.35
COL1A2-202ENST00000461525 SEPSECSQ9HD40 501 aaKnown RBP12.85□□□□□ -0.35
COL1A2-202ENST00000461525 CLEC5AQ9NY25 188 aa12.85□□□□□ -0.35
COL1A2-202ENST00000461525 DEDDO75618 318 aa12.84□□□□□ -0.35
COL1A2-202ENST00000461525 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
COL1A2-202ENST00000461525 RBMY1CP0DJD4 496 aa12.84□□□□□ -0.35
COL1A2-202ENST00000461525 VAMP1P23763 118 aa12.84□□□□□ -0.35
COL1A2-202ENST00000461525 GPX4P36969 197 aaPredicted RBP12.84□□□□□ -0.35
COL1A2-202ENST00000461525 NUTF2P61970 127 aaKnown RBP12.84□□□□□ -0.35
COL1A2-202ENST00000461525 RBMY1FQ15415 496 aaKnown RBP12.84□□□□□ -0.35
COL1A2-202ENST00000461525 OR8G2PQ6IF36 304 aa12.84□□□□□ -0.35
COL1A2-202ENST00000461525 TBC1D24Q9ULP9 559 aa12.84□□□□□ -0.35
COL1A2-202ENST00000461525 C11orf94C9JXX5 98 aa12.83□□□□□ -0.36
COL1A2-202ENST00000461525 FABP1P07148 127 aa12.83□□□□□ -0.36
COL1A2-202ENST00000461525 TCTAP57738 103 aa12.83□□□□□ -0.36
COL1A2-202ENST00000461525 GAMTQ14353 236 aa12.83□□□□□ -0.36
COL1A2-202ENST00000461525 CENPSQ8N2Z9 138 aa12.83□□□□□ -0.36
COL1A2-202ENST00000461525 V9GYH0 126 aa12.83□□□□□ -0.36
COL1A2-202ENST00000461525 X6R8D5 127 aa12.83□□□□□ -0.36
COL1A2-202ENST00000461525 CCDC160A6NGH7 325 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 PITX3O75364 302 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 IAPPP10997 89 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 S100A5P33763 92 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 LYZP61626 148 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 RAB11AP62491 216 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 ZNF90Q03938 601 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 CSNK1G2-AS1Q8NCQ2 148 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 SLC25A21Q9BQT8 299 aaPredicted RBP12.82□□□□□ -0.36
COL1A2-202ENST00000461525 C1QTNF4Q9BXJ3 329 aa12.82□□□□□ -0.36
COL1A2-202ENST00000461525 PAIP2BQ9ULR5 123 aaKnown RBP12.82□□□□□ -0.36
COL1A2-202ENST00000461525 IGKV1D-37A0A075B6S9 117 aa12.81□□□□□ -0.36
COL1A2-202ENST00000461525 H3BMM0 161 aa12.81□□□□□ -0.36
COL1A2-202ENST00000461525 SLC25A6P12236 298 aa12.81□□□□□ -0.36
COL1A2-202ENST00000461525 LRTM2Q8N967 370 aa12.81□□□□□ -0.36
COL1A2-202ENST00000461525 DEDD2Q8WXF8 326 aa12.81□□□□□ -0.36
COL1A2-202ENST00000461525 IGLL5B9A064 214 aa12.8□□□□□ -0.36
COL1A2-202ENST00000461525 MED6O75586 246 aa12.8□□□□□ -0.36
COL1A2-202ENST00000461525 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
COL1A2-202ENST00000461525 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
COL1A2-202ENST00000461525 ZNF79Q15937 498 aa12.8□□□□□ -0.36
COL1A2-202ENST00000461525 PPP1R14BQ96C90 147 aa12.8□□□□□ -0.36
COL1A2-202ENST00000461525 CIB3Q96Q77 187 aaPredicted RBP12.8□□□□□ -0.36
COL1A2-202ENST00000461525 XCL2Q9UBD3 114 aa12.8□□□□□ -0.36
COL1A2-202ENST00000461525 TMED3Q9Y3Q3 217 aa12.8□□□□□ -0.36
COL1A2-202ENST00000461525 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
COL1A2-202ENST00000461525 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
COL1A2-202ENST00000461525 SNRPGP15A8MWD9 76 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 SFT2D2O95562 160 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 ID1P41134 155 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 PPP1R1AQ13522 171 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 OR2F1Q13607 317 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 C1orf194Q5T5A4 169 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 Q6ZTC4 211 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 TRGV9Q99603 122 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 AGRNO00468 2067 aa12.79□□□□□ -0.36
COL1A2-202ENST00000461525 TRAV10A0A0B4J240 114 aa12.78□□□□□ -0.36
COL1A2-202ENST00000461525 RPP30P78346 268 aaKnown RBP12.78□□□□□ -0.36
COL1A2-202ENST00000461525 CCDC190Q86UF4 302 aa12.78□□□□□ -0.36
COL1A2-202ENST00000461525 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
COL1A2-202ENST00000461525 LINC00052Q96N35 136 aa12.78□□□□□ -0.36
COL1A2-202ENST00000461525 MAGT1Q9H0U3 335 aa12.78□□□□□ -0.36
COL1A2-202ENST00000461525 APLNQ9ULZ1 77 aa12.78□□□□□ -0.36
COL1A2-202ENST00000461525 SYNGR2O43760 224 aa12.77□□□□□ -0.37
COL1A2-202ENST00000461525 HOXB5P09067 269 aa12.77□□□□□ -0.37
COL1A2-202ENST00000461525 PSMB3P49720 205 aa12.77□□□□□ -0.37
COL1A2-202ENST00000461525 THAP8Q8NA92 274 aa12.77□□□□□ -0.37
COL1A2-202ENST00000461525 WDR12Q9GZL7 423 aaKnown RBP12.77□□□□□ -0.37
COL1A2-202ENST00000461525 IGKV1OR2-108A0A075B7D4 117 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 WRBO00258 174 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 DEFB1P60022 68 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 PRR20EP86478 221 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 PRR20CP86479 221 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 PRR20DP86480 221 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 PRR20BP86481 221 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 PRR20AP86496 221 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 GDF5OSQ5U4N7 250 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 GGNBP1Q5YKI7 109 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
COL1A2-202ENST00000461525 OR8I2Q8N0Y5 310 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms