RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PDLIM3Q53GG5 364 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 PVRIGQ6DKI7 326 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 NFE4Q86UQ8 179 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 LGI3Q8N145 548 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 OR52B4Q8NGK2 314 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 DLX4Q92988 240 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 ZNF414Q96IQ9 312 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 USMG5Q96IX5 58 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 ST6GAL2Q96JF0 529 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 ATG101Q9BSB4 218 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 HINT2Q9BX68 163 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 C20orf85Q9H1P6 137 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 HIPK2Q9H2X6 1198 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 FKBP11Q9NYL4 201 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 CACNG5Q9UF02 275 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 SHPKQ9UHJ6 478 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 KCNIP3Q9Y2W7 256 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 F11RQ9Y624 299 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 S4R3C0 116 aa6.08□□□□□ -1.44
ECHDC1-212ENST00000461239 TRAV6A0A075B6T7 132 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 C13orf42A0A1B0GVH6 325 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 FAM223BA6NKX1 122 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 MPTX1A8MV57 137 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 INS-IGF2F8WCM5 200 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 LINC01619G3V211 115 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 K7EIM0 57 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 BMPR1BO00238 502 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 TSHBP01222 138 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 HSPB1P04792 205 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 UBE2MP61081 183 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 ZNF616Q08AN1 781 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 OXA1LQ15070 435 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 C15orf32Q32M92 178 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 BSXQ3C1V8 233 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 THOC7Q6I9Y2 204 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 FAM223AQ8IWN6 122 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 NECAP1Q8NC96 275 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 OR52E5Q8NH55 327 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 DCUN1D4Q92564 292 aa6.07□□□□□ -1.44
ECHDC1-212ENST00000461239 IGHV3-21A0A0B4J1V1 117 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 IGLV9-49A0A0B4J1Y8 123 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 A0A0G2JLM5 398 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 PPP5D1E7EU14 171 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 I3L2K1 104 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 ADAP1O75689 374 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 ATG12O94817 140 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 HLA-AP01891 365 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 RNASE2P10153 161 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 ANXA3P12429 323 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 SPNP16150 400 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 NPBWR1P48145 328 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 RAB25P57735 213 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 KRTAP10-11P60412 298 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 SPCS3P61009 180 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 ATP5G2Q06055 141 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 EXOSC2Q13868 293 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 KLF5Q13887 457 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 KPRPQ5T749 579 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 IL34Q6ZMJ4 242 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 HSD17B13Q7Z5P4 300 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 LYG2Q86SG7 212 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 DUSP18Q8NEJ0 188 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 OR1P1Q8NH06 330 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 ZNF502Q8TBZ5 544 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 SEC22CQ9BRL7 303 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 NUDT15Q9NV35 164 aa6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 PEF1Q9UBV8 284 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-212ENST00000461239 A0A1B0GU03 582 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 A0A1B0GUV1 79 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 FAM240BA0A1B0GVZ2 78 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 DUXBA0A1W2PPF3 345 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 DUS4LO95620 317 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 IFNA17P01571 189 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 APOHP02749 345 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 OR8U8P0C7N1 319 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 FRMD6-AS1P0C7T7 363 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 SULT1A3P0DMM9 295 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 SULT1A4P0DMN0 295 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 DEFA4P12838 97 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 HIST1H1BP16401 226 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 SRPXP78539 464 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 TNFRSF9Q07011 255 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 SMCO1Q147U7 214 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 SLC25A24Q6NUK1 477 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 SPSB3Q6PJ21 355 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 RNASE11Q8TAA1 199 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 MITD1Q8WV92 249 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 PLEKHA3Q9HB20 300 aa6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 MRPL36Q9P0J6 103 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-212ENST00000461239 PTTG1O95997 202 aa6.04□□□□□ -1.44
ECHDC1-212ENST00000461239 DHFRP00374 187 aa6.04□□□□□ -1.44
ECHDC1-212ENST00000461239 IGHV3-48P01763 117 aa6.04□□□□□ -1.44
ECHDC1-212ENST00000461239 SLC25A6P12236 298 aa6.04□□□□□ -1.44
ECHDC1-212ENST00000461239 DEFA1P59665 94 aa6.04□□□□□ -1.44
ECHDC1-212ENST00000461239 DEFA3P59666 94 aa6.04□□□□□ -1.44
ECHDC1-212ENST00000461239 CLEC19AQ6UXS0 136 aa6.04□□□□□ -1.44
ECHDC1-212ENST00000461239 ADAMTSL5Q6ZMM2 481 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms