RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 DPH3P1Q9H4G8 78 aa6.96□□□□□ -1.3
MCF2L2-205ENST00000461074 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 C15orf32Q32M92 178 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 KIAA1644Q3SXP7 199 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 RNF126Q9BV68 326 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 ZNF815PA8K554 130 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 H3BTX0 84 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 ETV2O00321 342 aaPredicted RBP6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 NDUFS6O75380 124 aaKnown RBP6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 CT83Q5H943 113 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 TMEM14EPQ6UXP3 125 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 C1QL4Q86Z23 238 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 IGKV1D-13A0A0B4J2D9 117 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 FAM231BA6NCW3 169 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 IGKV1-13P0DP09 117 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 UBE2DNLQ8IWF7 75 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 COQ2Q96H96 371 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 GPHA2Q96T91 129 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 ABCA7Q8IZY2 2146 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 H0YJW9 148 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 IGKCP01834 107 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 HSD52Q0P140 79 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 ZNF837Q96EG3 531 aaPredicted RBP6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 A0A087WX48 190 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 GRIFINA4D1Z8 144 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 AKIRIN1Q9H9L7 192 aaPredicted RBP6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 IGHV3-23P01764 117 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 CKS1BP61024 79 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 ZNF585BQ52M93 769 aa6.95□□□□□ -1.3
MCF2L2-205ENST00000461074 GGTLC3B5MD39 225 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 K7ENP7 123 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 IGHV3-11P01762 117 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 UBE2E1P51965 193 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 ATXN8Q156A1 80 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 FBLN7Q53RD9 439 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 FAM201AQ5SY85 155 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 LCN12Q6JVE5 192 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 TREML4Q6UXN2 200 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 GGTLC1Q9BX51 225 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 FNDC1Q4ZHG4 1894 aaPredicted RBP6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 RCHY1Q96PM5 261 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 DAZ1Q9NQZ3 744 aaKnown RBP6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 FOXA3P55318 350 aaPredicted RBP6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 SRSF4Q08170 494 aaKnown RBP6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 TOMM7Q9P0U1 55 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 CLDN16Q9Y5I7 305 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 SHISA3A0PJX4 238 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 E9PQ18 207 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 SAP30O75446 220 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 NIT1Q86X76 327 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 DMRTA2Q96SC8 542 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 A0A0G2JNJ9 132 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 H3BUA1 57 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 SNRPCP09234 159 aaKnown RBP6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 CHCHD5Q9BSY4 110 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 Q9UFV3 132 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 PAQR4Q8N4S7 273 aaPredicted RBP6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 RMI2Q96E14 147 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 GAFA1Q96PS6 74 aa6.94□□□□□ -1.3
MCF2L2-205ENST00000461074 SCN5AQ14524 2016 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 MDKP21741 143 aaPredicted RBP6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 DNAJC30Q96LL9 226 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 MRPL27Q9P0M9 148 aaKnown RBP6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 IGHV3-35A0A0C4DH35 117 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 PINLYPA6NC86 204 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 RAMP3O60896 148 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 SRD5A1P18405 259 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 SLC17A3O00476 420 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 CA1P00915 261 aaPredicted RBP6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 IGHV3-48P01763 117 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 CD33P20138 364 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 IFI27L1Q96BM0 104 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 C18orf15Q96N68 181 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 SIGLEC9Q9Y336 463 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 IGHV3-66A0A0C4DH42 116 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 A0A1B0GWB2 263 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 YPEL3P61236 119 aaPredicted RBP6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 RPRMLQ8N4K4 120 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 LINC00311Q8N616 119 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 ARHGEF17Q96PE2 2063 aaPredicted RBP6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 IGHV3OR16-13A0A075B7E8 117 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 IGHV3-74A0A0B4J1X5 117 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 FAM110DQ8TAY7 271 aaPredicted RBP6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 ZNF474Q6S9Z5 364 aaPredicted RBP6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 TEX43Q6ZNM6 134 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 SPCS1Q9Y6A9 102 aa6.93□□□□□ -1.3
MCF2L2-205ENST00000461074 IGHV3-49A0A0A0MS15 119 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 B3GALT5-AS1P59052 145 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 FOXF2Q12947 444 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 PSG3Q16557 428 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 PNRC2Q9NPJ4 139 aaKnown RBP6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 THSD7BQ9C0I4 1608 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 TCRAP04437 139 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 HOXA3O43365 443 aaPredicted RBP6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 TRIOBPQ9H2D6 2365 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 CDK2AP2O75956 126 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 CD55P08174 381 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 PAX2Q02962 417 aa6.92□□□□□ -1.3
MCF2L2-205ENST00000461074 LY6G6FQ5SQ64 297 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms