RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PGA5P0DJD9 388 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 PSG2P11465 335 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 AZU1P20160 251 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 CTRLP40313 264 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 MDH2P40926 338 aaKnown RBP3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 LPAR6P43657 344 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 TFPI2P48307 235 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 DLX1P56177 255 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 CAV3P56539 151 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 TAS2R31P59538 309 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 TAS2R20P59543 309 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 PLP1P60201 277 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 GAGE5Q13069 117 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 GAGE6Q13070 117 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 PDLIM3Q53GG5 364 aaPredicted RBP3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 FAM78BQ5VT40 261 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 AADACL3Q5VUY0 350 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 DMKNQ6E0U4 476 aaPredicted RBP3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 UNQ6126/PRO20091Q6UXV3 157 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 MAPKAPK5-AS1Q8N8E1 139 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 ZDHHC22Q8N966 263 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 OR52E5Q8NH55 327 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 CLDND2Q8NHS1 167 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 RPS4Y2Q8TD47 263 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 PHLDA1Q8WV24 401 aaPredicted RBP3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 LRRC29Q8WV35 223 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 PPP1R1CQ8WVI7 109 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 DCUN1D4Q92564 292 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 RDH5Q92781 318 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 PTH2Q96A98 100 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 GALMQ96C23 342 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 GPR82Q96P67 336 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 NIPSNAP3BQ9BS92 247 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 RSG1Q9BU20 258 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 MAP1LC3BQ9GZQ8 125 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 OR51I2Q9H344 312 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 MTCH1Q9NZJ7 389 aa3.85□□□□□ -1.79
ATPAF1-203ENST00000460928 MGAM2Q2M2H8 2515 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 TRAV18A0A075B6X5 111 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 IGLV5-45A0A087WSX0 123 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 A0A087X0K7 114 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 TRBV5-5A0A0J9YX44 114 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 A0A1B0GU03 582 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 TMEM212A6NML5 194 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 H3BQ15 152 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 GEMIN2O14893 280 aaKnown RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 PHF1O43189 567 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 CD5LO43866 347 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 SAP30O75446 220 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 CDS2O95674 445 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 LY6G6DO95868 133 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 GYPAP02724 150 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 MAS1P04201 325 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 ISG15P05161 165 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 CTSDP07339 412 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 IGLC1P0CG04 106 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 IGLC2P0DOY2 106 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 IGLC3P0DOY3 106 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 GNB3P16520 340 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 BCL3P20749 454 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 USF1P22415 310 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 OR3A4PP47883 348 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 TAS2R30P59541 319 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 LMO4P61968 165 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 RPL32P62910 135 aaKnown RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 HLA-DRB3P79483 266 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 LCN2P80188 198 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 HSD52Q0P140 79 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 PMCHL1Q16048 86 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 ACSM3Q53FZ2 586 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 ACTL10Q5JWF8 245 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 C12orf54Q6X4T0 127 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 Q6ZSR3 168 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 FA2HQ7L5A8 372 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 CEACAM19Q7Z692 300 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 C1orf174Q8IYL3 243 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 BOD1L2Q8IYS8 172 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 LRRC75A-AS1Q8N1F1 130 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 FAM216BQ8N7L0 139 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 ZSCAN4Q8NAM6 433 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 POC1AQ8NBT0 407 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 OR1N2Q8NGR9 330 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 ZNF418Q8TF45 676 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 AQP3Q92482 292 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 FAM46BQ96A09 425 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 PTX4Q96A99 478 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 SMIM19Q96E16 107 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 RBMXL1Q96E39 390 aaKnown RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 S100A16Q96FQ6 103 aaKnown RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 OR10C1Q96KK4 312 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 CCL13Q99616 98 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 CTSZQ9UBR2 303 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 MTFP1Q9UDX5 166 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 ERG28Q9UKR5 140 aa3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 SOX21Q9Y651 276 aaPredicted RBP3.84□□□□□ -1.79
ATPAF1-203ENST00000460928 IGHV3OR16-10A0A075B7F0 116 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 BORCS7-ASMTA0A0B4J1R7 106 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 CEACAM18A8MTB9 384 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 HAND1O96004 215 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms