RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 IGHV3-23P01764 117 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 ATP5G3P48201 142 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 CRIP2P52943 208 aaPredicted RBP13.58□□□□□ -0.24
CDK11A-209ENST00000460465 KIAA0141Q14154 515 aaPredicted RBP13.58□□□□□ -0.24
CDK11A-209ENST00000460465 KLK9Q2XQG4 91 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 CST9LP1Q5W188 147 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 PQLC2Q6ZP29 291 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 C9orf139Q6ZV77 190 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 ZNF48Q96MX3 618 aaPredicted RBP13.58□□□□□ -0.24
CDK11A-209ENST00000460465 FOXC2Q99958 501 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 LINC00527Q9UJ94 153 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 KLK9Q9UKQ9 250 aa13.58□□□□□ -0.24
CDK11A-209ENST00000460465 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDK11A-209ENST00000460465 PDZD2O15018 2839 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 TRAV41A0A0B4J266 112 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 IER3P46695 156 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 PLP1P60201 277 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 Q56UQ5 140 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 C19orf54Q5BKX5 351 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 LINC00305Q7Z4B0 112 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 FAM167A-AS1Q96KT0 104 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 HYPMO75409 117 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 RD3LP0DJH9 198 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 LYZP61626 148 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 BLCAPP62952 87 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 OR5AU1Q8NGC0 362 aa13.57□□□□□ -0.24
CDK11A-209ENST00000460465 YTHDF2Q9Y5A9 579 aaKnown RBP13.57□□□□□ -0.24
CDK11A-209ENST00000460465 TRAV30A0A087WSZ9 112 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 TRBV9A0A0B4J1U6 114 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 IGHG2P01859 326 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 FABP1P07148 127 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 RHOGP84095 191 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 C20orf24Q9BUV8 137 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 H3BQ15 152 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 M0R036 132 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 TOMM40O96008 361 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 OR10J4P0C629 311 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 AWAT1Q58HT5 328 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 VN1R17PQ8TDU5 208 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 TMEM167BQ9NRX6 74 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 ZANQ9Y493 2812 aa13.56□□□□□ -0.24
CDK11A-209ENST00000460465 GCN1Q92616 2671 aaKnown RBP13.56□□□□□ -0.24
CDK11A-209ENST00000460465 FAM74A7A6NL05 159 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 TMEM250H0YL14 139 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 NDUFS6O75380 124 aaKnown RBP13.55□□□□□ -0.24
CDK11A-209ENST00000460465 IGF1P05019 195 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 C15orf32Q32M92 178 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 Q6ZS46 218 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 MS4A10Q96PG2 267 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 CSPG4Q6UVK1 2322 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 FAM74A3Q4VXF1 159 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 OR51G1Q8NGK1 321 aa13.55□□□□□ -0.24
CDK11A-209ENST00000460465 OR2T8A6NH00 312 aa13.54□□□□□ -0.24
CDK11A-209ENST00000460465 DNASE2O00115 360 aaPredicted RBP13.54□□□□□ -0.24
CDK11A-209ENST00000460465 YPEL3P61236 119 aaPredicted RBP13.54□□□□□ -0.24
CDK11A-209ENST00000460465 Q6YL49 198 aa13.54□□□□□ -0.24
CDK11A-209ENST00000460465 NIPSNAP3BQ9BS92 247 aa13.54□□□□□ -0.24
CDK11A-209ENST00000460465 HIGD1AQ9Y241 93 aa13.54□□□□□ -0.24
CDK11A-209ENST00000460465 PDE6DO43924 150 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 PYYP10082 97 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 UBE2L3P68036 154 aaKnown RBP13.53□□□□□ -0.24
CDK11A-209ENST00000460465 NECAP1Q8NC96 275 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 OR5R1Q8NH85 324 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 ZNF502Q8TBZ5 544 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 RPUSD4Q96CM3 377 aaKnown RBP13.53□□□□□ -0.24
CDK11A-209ENST00000460465 NOL4LQ96MY1 436 aaPredicted RBP13.53□□□□□ -0.24
CDK11A-209ENST00000460465 TXN2Q99757 166 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 PCP4L1A6NKN8 68 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
CDK11A-209ENST00000460465 ZNF674Q2M3X9 581 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 TXNDC17Q9BRA2 123 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 PAXXQ9BUH6 204 aa13.53□□□□□ -0.24
CDK11A-209ENST00000460465 ZNF727A8MUV8 499 aa13.52□□□□□ -0.24
CDK11A-209ENST00000460465 NPPCP23582 126 aa13.52□□□□□ -0.24
CDK11A-209ENST00000460465 AKR1C3P42330 323 aa13.52□□□□□ -0.24
CDK11A-209ENST00000460465 TMEM88Q6PEY1 159 aa13.52□□□□□ -0.24
CDK11A-209ENST00000460465 ZNF491Q8N8L2 437 aa13.52□□□□□ -0.24
CDK11A-209ENST00000460465 PARLQ9H300 379 aa13.52□□□□□ -0.24
CDK11A-209ENST00000460465 OR51M1Q9H341 326 aa13.52□□□□□ -0.24
CDK11A-209ENST00000460465 C7orf77A4D0Y5 90 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 F6UZH7 168 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 IL4P05112 153 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 IL17RELQ6ZVW7 336 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 RNF125Q96EQ8 232 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 TVP23CQ96ET8 276 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 SMIM7Q9BQ49 75 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 RPS10P5Q9NQ39 176 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 MRPL27Q9P0M9 148 aaKnown RBP13.52□□□□□ -0.25
CDK11A-209ENST00000460465 ARL2-SNX15V9GYD0 113 aa13.52□□□□□ -0.25
CDK11A-209ENST00000460465 ITPR3Q14573 2671 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 WI2-2373I1.2A0A1W2PRP0 233 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 CTSGP08311 255 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 LEMD1Q68G75 181 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 CBLN2Q8IUK8 224 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 SLC25A39Q9BZJ4 359 aaPredicted RBP13.51□□□□□ -0.25
CDK11A-209ENST00000460465 VPREB3Q9UKI3 123 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 AP4M1O00189 453 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 SCGB2A1O75556 95 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 GPR183P32249 361 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 Q8WTZ3 238 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms