RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 C12orf45Q8N5I9 185 aaPredicted RBP0.04□□□□□ -2.4
TTC3-211ENST00000460328 CLDN22Q8N7P3 220 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 OR11H6Q8NGC7 330 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 OR2T35Q8NGX2 323 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 STAG3L4Q8TBR4 150 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 HIST1H2BLQ99880 126 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 C20orf27Q9GZN8 174 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 PSTPIP2Q9H939 334 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 UQCC1Q9NVA1 299 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 TMEM14CQ9P0S9 112 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 VPS29Q9UBQ0 182 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 MYO3BQ8WXR4 1341 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 CITO14578 2027 aa0.04□□□□□ -2.4
TTC3-211ENST00000460328 SBF1O95248 1867 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 hCG_1818297A0A087WSY0 165 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 A0A087WUJ7 227 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 IGHV1-58A0A0C4DH39 117 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 hADV38S2A0JD32 116 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 SMIM9A6NGZ8 99 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 A8MT66 165 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 CCDC122Q5T0U0 273 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 ST6GALNAC3Q8NDV1 305 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 DCUN1D1Q96GG9 259 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 PRADC1Q9BSG0 188 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 CCDC90BQ9GZT6 254 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 FBXO5Q9UKT4 447 aa0.03□□□□□ -2.4
TTC3-211ENST00000460328 RIMBP3CA6NJZ7 1639 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 RIMBP3BA6NNM3 1639 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 RIMBP3Q9UFD9 1639 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 ARHGEF28Q8N1W1 1705 aaKnown RBP0.02□□□□□ -2.41
TTC3-211ENST00000460328 ZNF462Q96JM2 2506 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 TCRBV4S1A1TA0A5B7 111 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 C7orf71A4D174 169 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 RBP1P09455 135 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 RNASE4P34096 147 aaKnown RBP0.02□□□□□ -2.41
TTC3-211ENST00000460328 YPEL3P61236 119 aaPredicted RBP0.02□□□□□ -2.41
TTC3-211ENST00000460328 C12orf74Q32Q52 190 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 SLC30A7Q8NEW0 376 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 OR2T10Q8NGZ9 312 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 TMEM254Q8TBM7 123 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 LINC00052Q96N35 136 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 NHP2Q9NX24 153 aaKnown RBP0.02□□□□□ -2.41
TTC3-211ENST00000460328 PRELID3BQ9Y3B1 194 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 KIAA1549Q9HCM3 1950 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 MAP3K5Q99683 1374 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 ZFYVE9O95405 1425 aa0.02□□□□□ -2.41
TTC3-211ENST00000460328 SCN10AQ9Y5Y9 1956 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 SNRNP200O75643 2136 aaKnown RBP0.01□□□□□ -2.41
TTC3-211ENST00000460328 SYNE1Q8NF91 8797 aaKnown RBP0.01□□□□□ -2.41
TTC3-211ENST00000460328 CYB5BO43169 146 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 NUPR1O60356 82 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 TIMM17BO60830 172 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 DHFRP00374 187 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 SERPINA6P08185 405 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 RPS17P08708 135 aaKnown RBP0.01□□□□□ -2.41
TTC3-211ENST00000460328 SERPINB9P50453 376 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 PDZD9Q8IXQ8 264 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 GDPD1Q8N9F7 314 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 PLPP5Q8NEB5 264 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 Q8TAT8 98 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 CT55Q8WUE5 264 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 C4orf3Q8WVX3 66 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 CCDC42Q96M95 316 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 C14orf132Q9NPU4 83 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 NIT2Q9NQR4 276 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 IDI2-AS1Q9NZ38 188 aa0.01□□□□□ -2.41
TTC3-211ENST00000460328 NUPR2A6NF83 97 aa0□□□□□ -2.41
TTC3-211ENST00000460328 ROMO1P60602 79 aa0□□□□□ -2.41
TTC3-211ENST00000460328 RANP62826 216 aaKnown RBP0□□□□□ -2.41
TTC3-211ENST00000460328 AESQ08117 197 aa0□□□□□ -2.41
TTC3-211ENST00000460328 IMPG1Q17R60 797 aa0□□□□□ -2.41
TTC3-211ENST00000460328 SPINK9Q5DT21 86 aa0□□□□□ -2.41
TTC3-211ENST00000460328 Q6Q795 121 aa0□□□□□ -2.41
TTC3-211ENST00000460328 TRAPPC5Q8IUR0 188 aa0□□□□□ -2.41
TTC3-211ENST00000460328 NAV3Q8IVL0 2385 aa0□□□□□ -2.41
TTC3-211ENST00000460328 TEX47Q8TBZ9 253 aa0□□□□□ -2.41
TTC3-211ENST00000460328 TMEM126AQ9H061 195 aa0□□□□□ -2.41
TTC3-211ENST00000460328 WFDC10AQ9H1F0 79 aa0□□□□□ -2.41
TTC3-211ENST00000460328 TMEM133Q9H2Q1 129 aa0□□□□□ -2.41
TTC3-211ENST00000460328 PLXNA4Q9HCM2 1894 aa0□□□□□ -2.41
TTC3-211ENST00000460328 ORMDL1Q9P0S3 153 aa0□□□□□ -2.41
TTC3-211ENST00000460328 PCTPQ9UKL6 214 aa0□□□□□ -2.41
TTC3-211ENST00000460328 CCDC144AA2RUR9 1427 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 ADCY9O60503 1353 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 TRAV10A0A0B4J240 114 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 M0R036 132 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 KPNA3O00505 521 aaPredicted RBP-0.01□□□□□ -2.41
TTC3-211ENST00000460328 IGLV3-1P01715 115 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 ANP32AP39687 249 aaKnown RBP-0.01□□□□□ -2.41
TTC3-211ENST00000460328 MAGOHP61326 146 aaKnown RBP-0.01□□□□□ -2.41
TTC3-211ENST00000460328 LSM6P62312 80 aaKnown RBP-0.01□□□□□ -2.41
TTC3-211ENST00000460328 ITGB3BPQ13352 177 aaPredicted RBP-0.01□□□□□ -2.41
TTC3-211ENST00000460328 IAH1Q2TAA2 248 aaPredicted RBP-0.01□□□□□ -2.41
TTC3-211ENST00000460328 ZNF833PQ6ZTB9 187 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 OR6V1Q8N148 313 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 C2orf50Q96LR7 162 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 GPER1Q99527 375 aa-0.01□□□□□ -2.41
TTC3-211ENST00000460328 CMSS1Q9BQ75 279 aaKnown RBP-0.01□□□□□ -2.41
TTC3-211ENST00000460328 FAM103A1Q9BTL3 118 aaKnown RBP-0.01□□□□□ -2.41
TTC3-211ENST00000460328 GGACTQ9BVM4 153 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms